Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18345 | 55258;55259;55260 | chr2:178602369;178602368;178602367 | chr2:179467096;179467095;179467094 |
N2AB | 16704 | 50335;50336;50337 | chr2:178602369;178602368;178602367 | chr2:179467096;179467095;179467094 |
N2A | 15777 | 47554;47555;47556 | chr2:178602369;178602368;178602367 | chr2:179467096;179467095;179467094 |
N2B | 9280 | 28063;28064;28065 | chr2:178602369;178602368;178602367 | chr2:179467096;179467095;179467094 |
Novex-1 | 9405 | 28438;28439;28440 | chr2:178602369;178602368;178602367 | chr2:179467096;179467095;179467094 |
Novex-2 | 9472 | 28639;28640;28641 | chr2:178602369;178602368;178602367 | chr2:179467096;179467095;179467094 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/H | rs2053680681 | None | 0.391 | D | 0.607 | 0.805 | 0.630093501459 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 6.56E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
Y/H | rs2053680681 | None | 0.391 | D | 0.607 | 0.805 | 0.630093501459 | gnomAD-4.0.0 | 6.57955E-06 | None | None | None | None | N | None | 0 | 6.56426E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9798 | likely_pathogenic | 0.9807 | pathogenic | -3.289 | Highly Destabilizing | 0.996 | D | 0.816 | deleterious | None | None | None | None | N |
Y/C | 0.7166 | likely_pathogenic | 0.7242 | pathogenic | -2.014 | Highly Destabilizing | 1.0 | D | 0.819 | deleterious | D | 0.645076136 | None | None | N |
Y/D | 0.988 | likely_pathogenic | 0.9901 | pathogenic | -3.942 | Highly Destabilizing | 0.998 | D | 0.855 | deleterious | D | 0.677347023 | None | None | N |
Y/E | 0.9951 | likely_pathogenic | 0.9956 | pathogenic | -3.728 | Highly Destabilizing | 0.998 | D | 0.825 | deleterious | None | None | None | None | N |
Y/F | 0.2381 | likely_benign | 0.2481 | benign | -1.348 | Destabilizing | 0.994 | D | 0.717 | prob.delet. | D | 0.6084352 | None | None | N |
Y/G | 0.9482 | likely_pathogenic | 0.9545 | pathogenic | -3.698 | Highly Destabilizing | 0.999 | D | 0.837 | deleterious | None | None | None | None | N |
Y/H | 0.9158 | likely_pathogenic | 0.9209 | pathogenic | -2.427 | Highly Destabilizing | 0.391 | N | 0.607 | neutral | D | 0.651808911 | None | None | N |
Y/I | 0.9428 | likely_pathogenic | 0.9395 | pathogenic | -1.903 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
Y/K | 0.9951 | likely_pathogenic | 0.9952 | pathogenic | -2.639 | Highly Destabilizing | 0.999 | D | 0.842 | deleterious | None | None | None | None | N |
Y/L | 0.9261 | likely_pathogenic | 0.9163 | pathogenic | -1.903 | Destabilizing | 0.996 | D | 0.777 | deleterious | None | None | None | None | N |
Y/M | 0.9603 | likely_pathogenic | 0.9609 | pathogenic | -1.615 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
Y/N | 0.903 | likely_pathogenic | 0.9114 | pathogenic | -3.528 | Highly Destabilizing | 0.997 | D | 0.837 | deleterious | D | 0.677145219 | None | None | N |
Y/P | 0.9976 | likely_pathogenic | 0.9981 | pathogenic | -2.384 | Highly Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
Y/Q | 0.991 | likely_pathogenic | 0.9916 | pathogenic | -3.242 | Highly Destabilizing | 0.999 | D | 0.817 | deleterious | None | None | None | None | N |
Y/R | 0.9866 | likely_pathogenic | 0.9867 | pathogenic | -2.43 | Highly Destabilizing | 0.998 | D | 0.842 | deleterious | None | None | None | None | N |
Y/S | 0.9572 | likely_pathogenic | 0.9623 | pathogenic | -3.791 | Highly Destabilizing | 0.998 | D | 0.835 | deleterious | D | 0.677347023 | None | None | N |
Y/T | 0.9829 | likely_pathogenic | 0.9836 | pathogenic | -3.457 | Highly Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
Y/V | 0.8942 | likely_pathogenic | 0.8928 | pathogenic | -2.384 | Highly Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
Y/W | 0.764 | likely_pathogenic | 0.7894 | pathogenic | -0.683 | Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.