Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18350 | 55273;55274;55275 | chr2:178602354;178602353;178602352 | chr2:179467081;179467080;179467079 |
N2AB | 16709 | 50350;50351;50352 | chr2:178602354;178602353;178602352 | chr2:179467081;179467080;179467079 |
N2A | 15782 | 47569;47570;47571 | chr2:178602354;178602353;178602352 | chr2:179467081;179467080;179467079 |
N2B | 9285 | 28078;28079;28080 | chr2:178602354;178602353;178602352 | chr2:179467081;179467080;179467079 |
Novex-1 | 9410 | 28453;28454;28455 | chr2:178602354;178602353;178602352 | chr2:179467081;179467080;179467079 |
Novex-2 | 9477 | 28654;28655;28656 | chr2:178602354;178602353;178602352 | chr2:179467081;179467080;179467079 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.92 | N | 0.751 | 0.233 | 0.26169431596 | gnomAD-4.0.0 | 6.00162E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.56252E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5819 | likely_pathogenic | 0.5471 | ambiguous | -1.213 | Destabilizing | 0.863 | D | 0.703 | prob.neutral | None | None | None | None | N |
K/C | 0.5996 | likely_pathogenic | 0.6273 | pathogenic | -1.692 | Destabilizing | 0.999 | D | 0.699 | prob.neutral | None | None | None | None | N |
K/D | 0.9455 | likely_pathogenic | 0.9366 | pathogenic | -1.997 | Destabilizing | 0.991 | D | 0.686 | prob.neutral | None | None | None | None | N |
K/E | 0.5063 | ambiguous | 0.4835 | ambiguous | -1.782 | Destabilizing | 0.92 | D | 0.751 | deleterious | N | 0.498490319 | None | None | N |
K/F | 0.7984 | likely_pathogenic | 0.762 | pathogenic | -0.588 | Destabilizing | 0.991 | D | 0.724 | prob.delet. | None | None | None | None | N |
K/G | 0.8403 | likely_pathogenic | 0.8028 | pathogenic | -1.603 | Destabilizing | 0.969 | D | 0.686 | prob.neutral | None | None | None | None | N |
K/H | 0.4933 | ambiguous | 0.4696 | ambiguous | -1.912 | Destabilizing | 0.999 | D | 0.675 | prob.neutral | None | None | None | None | N |
K/I | 0.3435 | ambiguous | 0.3468 | ambiguous | -0.143 | Destabilizing | 0.134 | N | 0.612 | neutral | N | 0.440020805 | None | None | N |
K/L | 0.3994 | ambiguous | 0.4068 | ambiguous | -0.143 | Destabilizing | 0.759 | D | 0.697 | prob.neutral | None | None | None | None | N |
K/M | 0.2149 | likely_benign | 0.2279 | benign | -0.594 | Destabilizing | 0.991 | D | 0.693 | prob.neutral | None | None | None | None | N |
K/N | 0.7787 | likely_pathogenic | 0.7582 | pathogenic | -1.805 | Destabilizing | 0.988 | D | 0.715 | prob.delet. | N | 0.467040372 | None | None | N |
K/P | 0.9953 | likely_pathogenic | 0.9945 | pathogenic | -0.477 | Destabilizing | 0.997 | D | 0.699 | prob.neutral | None | None | None | None | N |
K/Q | 0.2806 | likely_benign | 0.2651 | benign | -1.591 | Destabilizing | 0.976 | D | 0.734 | prob.delet. | N | 0.490041407 | None | None | N |
K/R | 0.095 | likely_benign | 0.0935 | benign | -1.469 | Destabilizing | 0.035 | N | 0.551 | neutral | N | 0.358365001 | None | None | N |
K/S | 0.6846 | likely_pathogenic | 0.6554 | pathogenic | -2.189 | Highly Destabilizing | 0.969 | D | 0.722 | prob.delet. | None | None | None | None | N |
K/T | 0.208 | likely_benign | 0.2351 | benign | -1.771 | Destabilizing | 0.959 | D | 0.685 | prob.neutral | N | 0.436903142 | None | None | N |
K/V | 0.3161 | likely_benign | 0.3409 | ambiguous | -0.477 | Destabilizing | 0.759 | D | 0.697 | prob.neutral | None | None | None | None | N |
K/W | 0.8375 | likely_pathogenic | 0.8152 | pathogenic | -0.757 | Destabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | N |
K/Y | 0.7442 | likely_pathogenic | 0.6975 | pathogenic | -0.367 | Destabilizing | 0.997 | D | 0.701 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.