Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18354 | 55285;55286;55287 | chr2:178602342;178602341;178602340 | chr2:179467069;179467068;179467067 |
N2AB | 16713 | 50362;50363;50364 | chr2:178602342;178602341;178602340 | chr2:179467069;179467068;179467067 |
N2A | 15786 | 47581;47582;47583 | chr2:178602342;178602341;178602340 | chr2:179467069;179467068;179467067 |
N2B | 9289 | 28090;28091;28092 | chr2:178602342;178602341;178602340 | chr2:179467069;179467068;179467067 |
Novex-1 | 9414 | 28465;28466;28467 | chr2:178602342;178602341;178602340 | chr2:179467069;179467068;179467067 |
Novex-2 | 9481 | 28666;28667;28668 | chr2:178602342;178602341;178602340 | chr2:179467069;179467068;179467067 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.09 | N | 0.471 | 0.104 | 0.247872288689 | gnomAD-4.0.0 | 1.59318E-06 | None | None | None | None | N | None | 5.67279E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/Q | rs1559697777 | None | 0.324 | N | 0.339 | 0.096 | 0.234412748748 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/Q | rs1559697777 | None | 0.324 | N | 0.339 | 0.096 | 0.234412748748 | gnomAD-4.0.0 | 3.84745E-06 | None | None | None | None | N | None | 1.69285E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 4.7912E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.0873 | likely_benign | 0.0868 | benign | -0.122 | Destabilizing | 0.001 | N | 0.135 | neutral | N | 0.42454992 | None | None | N |
E/C | 0.6988 | likely_pathogenic | 0.7268 | pathogenic | 0.146 | Stabilizing | 0.944 | D | 0.434 | neutral | None | None | None | None | N |
E/D | 0.0941 | likely_benign | 0.0934 | benign | -0.194 | Destabilizing | 0.001 | N | 0.068 | neutral | N | 0.472381153 | None | None | N |
E/F | 0.5886 | likely_pathogenic | 0.6065 | pathogenic | -0.187 | Destabilizing | 0.818 | D | 0.46 | neutral | None | None | None | None | N |
E/G | 0.1324 | likely_benign | 0.1316 | benign | -0.261 | Destabilizing | 0.09 | N | 0.471 | neutral | N | 0.501178333 | None | None | N |
E/H | 0.3493 | ambiguous | 0.3641 | ambiguous | 0.159 | Stabilizing | 0.932 | D | 0.315 | neutral | None | None | None | None | N |
E/I | 0.2276 | likely_benign | 0.2322 | benign | 0.188 | Stabilizing | 0.69 | D | 0.479 | neutral | None | None | None | None | N |
E/K | 0.1159 | likely_benign | 0.1202 | benign | 0.607 | Stabilizing | 0.324 | N | 0.327 | neutral | N | 0.427763584 | None | None | N |
E/L | 0.247 | likely_benign | 0.2505 | benign | 0.188 | Stabilizing | 0.388 | N | 0.487 | neutral | None | None | None | None | N |
E/M | 0.3162 | likely_benign | 0.3292 | benign | 0.213 | Stabilizing | 0.981 | D | 0.427 | neutral | None | None | None | None | N |
E/N | 0.165 | likely_benign | 0.1665 | benign | 0.368 | Stabilizing | 0.241 | N | 0.296 | neutral | None | None | None | None | N |
E/P | 0.4535 | ambiguous | 0.444 | ambiguous | 0.104 | Stabilizing | 0.818 | D | 0.419 | neutral | None | None | None | None | N |
E/Q | 0.1302 | likely_benign | 0.1303 | benign | 0.381 | Stabilizing | 0.324 | N | 0.339 | neutral | N | 0.49383386 | None | None | N |
E/R | 0.1998 | likely_benign | 0.2083 | benign | 0.705 | Stabilizing | 0.69 | D | 0.307 | neutral | None | None | None | None | N |
E/S | 0.135 | likely_benign | 0.1356 | benign | 0.233 | Stabilizing | 0.008 | N | 0.151 | neutral | None | None | None | None | N |
E/T | 0.1449 | likely_benign | 0.1481 | benign | 0.352 | Stabilizing | 0.241 | N | 0.413 | neutral | None | None | None | None | N |
E/V | 0.1432 | likely_benign | 0.1445 | benign | 0.104 | Stabilizing | 0.193 | N | 0.459 | neutral | N | 0.500106472 | None | None | N |
E/W | 0.8088 | likely_pathogenic | 0.835 | pathogenic | -0.124 | Destabilizing | 0.981 | D | 0.552 | neutral | None | None | None | None | N |
E/Y | 0.4418 | ambiguous | 0.4555 | ambiguous | 0.046 | Stabilizing | 0.932 | D | 0.443 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.