Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18389 | 55390;55391;55392 | chr2:178602106;178602105;178602104 | chr2:179466833;179466832;179466831 |
N2AB | 16748 | 50467;50468;50469 | chr2:178602106;178602105;178602104 | chr2:179466833;179466832;179466831 |
N2A | 15821 | 47686;47687;47688 | chr2:178602106;178602105;178602104 | chr2:179466833;179466832;179466831 |
N2B | 9324 | 28195;28196;28197 | chr2:178602106;178602105;178602104 | chr2:179466833;179466832;179466831 |
Novex-1 | 9449 | 28570;28571;28572 | chr2:178602106;178602105;178602104 | chr2:179466833;179466832;179466831 |
Novex-2 | 9516 | 28771;28772;28773 | chr2:178602106;178602105;178602104 | chr2:179466833;179466832;179466831 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | None | N | 0.131 | 0.168 | 0.115124310173 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1931 | likely_benign | 0.1915 | benign | -0.736 | Destabilizing | 0.005 | N | 0.252 | neutral | N | 0.471933728 | None | None | I |
V/C | 0.5745 | likely_pathogenic | 0.5505 | ambiguous | -0.528 | Destabilizing | None | N | 0.189 | neutral | None | None | None | None | I |
V/D | 0.3654 | ambiguous | 0.4163 | ambiguous | -0.728 | Destabilizing | 0.029 | N | 0.471 | neutral | N | 0.48401759 | None | None | I |
V/E | 0.2873 | likely_benign | 0.3323 | benign | -0.825 | Destabilizing | 0.072 | N | 0.479 | neutral | None | None | None | None | I |
V/F | 0.1487 | likely_benign | 0.1516 | benign | -0.83 | Destabilizing | 0.055 | N | 0.553 | neutral | D | 0.522151904 | None | None | I |
V/G | 0.2587 | likely_benign | 0.2722 | benign | -0.92 | Destabilizing | None | N | 0.327 | neutral | N | 0.521805187 | None | None | I |
V/H | 0.451 | ambiguous | 0.4656 | ambiguous | -0.511 | Destabilizing | 0.356 | N | 0.442 | neutral | None | None | None | None | I |
V/I | 0.0727 | likely_benign | 0.0646 | benign | -0.383 | Destabilizing | None | N | 0.081 | neutral | N | 0.436149073 | None | None | I |
V/K | 0.3985 | ambiguous | 0.4526 | ambiguous | -0.734 | Destabilizing | 0.072 | N | 0.483 | neutral | None | None | None | None | I |
V/L | 0.1477 | likely_benign | 0.1279 | benign | -0.383 | Destabilizing | None | N | 0.131 | neutral | N | 0.465605188 | None | None | I |
V/M | 0.1593 | likely_benign | 0.1368 | benign | -0.308 | Destabilizing | 0.214 | N | 0.447 | neutral | None | None | None | None | I |
V/N | 0.2049 | likely_benign | 0.1939 | benign | -0.372 | Destabilizing | None | N | 0.338 | neutral | None | None | None | None | I |
V/P | 0.5841 | likely_pathogenic | 0.5906 | pathogenic | -0.466 | Destabilizing | 0.136 | N | 0.559 | neutral | None | None | None | None | I |
V/Q | 0.2768 | likely_benign | 0.3038 | benign | -0.634 | Destabilizing | 0.356 | N | 0.575 | neutral | None | None | None | None | I |
V/R | 0.3493 | ambiguous | 0.4036 | ambiguous | -0.153 | Destabilizing | 0.072 | N | 0.549 | neutral | None | None | None | None | I |
V/S | 0.1678 | likely_benign | 0.1664 | benign | -0.717 | Destabilizing | None | N | 0.27 | neutral | None | None | None | None | I |
V/T | 0.1444 | likely_benign | 0.1398 | benign | -0.718 | Destabilizing | None | N | 0.123 | neutral | None | None | None | None | I |
V/W | 0.7074 | likely_pathogenic | 0.7293 | pathogenic | -0.94 | Destabilizing | 0.864 | D | 0.462 | neutral | None | None | None | None | I |
V/Y | 0.4221 | ambiguous | 0.4213 | ambiguous | -0.657 | Destabilizing | 0.356 | N | 0.568 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.