Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18390 | 55393;55394;55395 | chr2:178602103;178602102;178602101 | chr2:179466830;179466829;179466828 |
N2AB | 16749 | 50470;50471;50472 | chr2:178602103;178602102;178602101 | chr2:179466830;179466829;179466828 |
N2A | 15822 | 47689;47690;47691 | chr2:178602103;178602102;178602101 | chr2:179466830;179466829;179466828 |
N2B | 9325 | 28198;28199;28200 | chr2:178602103;178602102;178602101 | chr2:179466830;179466829;179466828 |
Novex-1 | 9450 | 28573;28574;28575 | chr2:178602103;178602102;178602101 | chr2:179466830;179466829;179466828 |
Novex-2 | 9517 | 28774;28775;28776 | chr2:178602103;178602102;178602101 | chr2:179466830;179466829;179466828 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/Y | rs759877537 | -1.388 | 0.794 | N | 0.695 | 0.354 | 0.658123265804 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 6.48E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.5139 | ambiguous | 0.4652 | ambiguous | -1.796 | Destabilizing | 0.061 | N | 0.45 | neutral | None | None | None | None | N |
C/D | 0.9562 | likely_pathogenic | 0.9489 | pathogenic | -0.777 | Destabilizing | 0.94 | D | 0.72 | prob.delet. | None | None | None | None | N |
C/E | 0.9488 | likely_pathogenic | 0.9384 | pathogenic | -0.661 | Destabilizing | 0.836 | D | 0.722 | prob.delet. | None | None | None | None | N |
C/F | 0.3565 | ambiguous | 0.3376 | benign | -1.186 | Destabilizing | 0.655 | D | 0.7 | prob.neutral | N | 0.461831377 | None | None | N |
C/G | 0.4502 | ambiguous | 0.4223 | ambiguous | -2.115 | Highly Destabilizing | 0.523 | D | 0.681 | prob.neutral | N | 0.475742037 | None | None | N |
C/H | 0.8273 | likely_pathogenic | 0.8014 | pathogenic | -2.219 | Highly Destabilizing | 0.983 | D | 0.691 | prob.neutral | None | None | None | None | N |
C/I | 0.4322 | ambiguous | 0.3945 | ambiguous | -0.969 | Destabilizing | 0.004 | N | 0.374 | neutral | None | None | None | None | N |
C/K | 0.938 | likely_pathogenic | 0.9284 | pathogenic | -1.2 | Destabilizing | 0.836 | D | 0.719 | prob.delet. | None | None | None | None | N |
C/L | 0.5116 | ambiguous | 0.479 | ambiguous | -0.969 | Destabilizing | 0.061 | N | 0.469 | neutral | None | None | None | None | N |
C/M | 0.6647 | likely_pathogenic | 0.625 | pathogenic | 0.028 | Stabilizing | 0.716 | D | 0.711 | prob.delet. | None | None | None | None | N |
C/N | 0.8586 | likely_pathogenic | 0.8353 | pathogenic | -1.242 | Destabilizing | 0.94 | D | 0.735 | prob.delet. | None | None | None | None | N |
C/P | 0.9845 | likely_pathogenic | 0.9863 | pathogenic | -1.219 | Destabilizing | 0.94 | D | 0.723 | prob.delet. | None | None | None | None | N |
C/Q | 0.8528 | likely_pathogenic | 0.8313 | pathogenic | -1.133 | Destabilizing | 0.94 | D | 0.736 | prob.delet. | None | None | None | None | N |
C/R | 0.7826 | likely_pathogenic | 0.7675 | pathogenic | -1.103 | Destabilizing | 0.794 | D | 0.736 | prob.delet. | N | 0.505371511 | None | None | N |
C/S | 0.5359 | ambiguous | 0.4917 | ambiguous | -1.748 | Destabilizing | 0.351 | N | 0.597 | neutral | N | 0.505024794 | None | None | N |
C/T | 0.5744 | likely_pathogenic | 0.5192 | ambiguous | -1.45 | Destabilizing | 0.228 | N | 0.574 | neutral | None | None | None | None | N |
C/V | 0.302 | likely_benign | 0.2841 | benign | -1.219 | Destabilizing | None | N | 0.387 | neutral | None | None | None | None | N |
C/W | 0.7755 | likely_pathogenic | 0.765 | pathogenic | -1.238 | Destabilizing | 0.978 | D | 0.663 | neutral | N | 0.505718227 | None | None | N |
C/Y | 0.557 | ambiguous | 0.5304 | ambiguous | -1.202 | Destabilizing | 0.794 | D | 0.695 | prob.neutral | N | 0.486516391 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.