Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18408 | 55447;55448;55449 | chr2:178602049;178602048;178602047 | chr2:179466776;179466775;179466774 |
N2AB | 16767 | 50524;50525;50526 | chr2:178602049;178602048;178602047 | chr2:179466776;179466775;179466774 |
N2A | 15840 | 47743;47744;47745 | chr2:178602049;178602048;178602047 | chr2:179466776;179466775;179466774 |
N2B | 9343 | 28252;28253;28254 | chr2:178602049;178602048;178602047 | chr2:179466776;179466775;179466774 |
Novex-1 | 9468 | 28627;28628;28629 | chr2:178602049;178602048;178602047 | chr2:179466776;179466775;179466774 |
Novex-2 | 9535 | 28828;28829;28830 | chr2:178602049;178602048;178602047 | chr2:179466776;179466775;179466774 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs1400469796 | None | 1.0 | D | 0.852 | 0.581 | 0.573918482621 | gnomAD-3.1.2 | 1.98E-05 | None | None | None | None | N | None | 7.26E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/S | rs1400469796 | None | 1.0 | D | 0.852 | 0.581 | 0.573918482621 | gnomAD-4.0.0 | 5.07684E-06 | None | None | None | None | N | None | 8.75289E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.6032 | likely_pathogenic | 0.6627 | pathogenic | -1.253 | Destabilizing | 1.0 | D | 0.791 | deleterious | N | 0.519256218 | None | None | N |
P/C | 0.9479 | likely_pathogenic | 0.9578 | pathogenic | -0.931 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
P/D | 0.9988 | likely_pathogenic | 0.9993 | pathogenic | -1.16 | Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | N |
P/E | 0.9955 | likely_pathogenic | 0.997 | pathogenic | -1.227 | Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | N |
P/F | 0.9975 | likely_pathogenic | 0.9987 | pathogenic | -1.328 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
P/G | 0.9633 | likely_pathogenic | 0.9701 | pathogenic | -1.473 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
P/H | 0.9941 | likely_pathogenic | 0.9965 | pathogenic | -1.061 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
P/I | 0.9696 | likely_pathogenic | 0.9814 | pathogenic | -0.777 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
P/K | 0.9962 | likely_pathogenic | 0.9976 | pathogenic | -0.845 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
P/L | 0.9264 | likely_pathogenic | 0.9561 | pathogenic | -0.777 | Destabilizing | 1.0 | D | 0.846 | deleterious | D | 0.538419975 | None | None | N |
P/M | 0.9849 | likely_pathogenic | 0.9908 | pathogenic | -0.555 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
P/N | 0.9969 | likely_pathogenic | 0.998 | pathogenic | -0.594 | Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | N |
P/Q | 0.987 | likely_pathogenic | 0.9913 | pathogenic | -0.893 | Destabilizing | 1.0 | D | 0.864 | deleterious | D | 0.542982787 | None | None | N |
P/R | 0.9876 | likely_pathogenic | 0.9918 | pathogenic | -0.333 | Destabilizing | 1.0 | D | 0.861 | deleterious | D | 0.542982787 | None | None | N |
P/S | 0.947 | likely_pathogenic | 0.9581 | pathogenic | -1.044 | Destabilizing | 1.0 | D | 0.852 | deleterious | D | 0.542475808 | None | None | N |
P/T | 0.9351 | likely_pathogenic | 0.9551 | pathogenic | -1.014 | Destabilizing | 1.0 | D | 0.859 | deleterious | D | 0.542475808 | None | None | N |
P/V | 0.8975 | likely_pathogenic | 0.9297 | pathogenic | -0.902 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
P/W | 0.9991 | likely_pathogenic | 0.9994 | pathogenic | -1.406 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
P/Y | 0.9979 | likely_pathogenic | 0.9989 | pathogenic | -1.097 | Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.