Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18409 | 55450;55451;55452 | chr2:178602046;178602045;178602044 | chr2:179466773;179466772;179466771 |
N2AB | 16768 | 50527;50528;50529 | chr2:178602046;178602045;178602044 | chr2:179466773;179466772;179466771 |
N2A | 15841 | 47746;47747;47748 | chr2:178602046;178602045;178602044 | chr2:179466773;179466772;179466771 |
N2B | 9344 | 28255;28256;28257 | chr2:178602046;178602045;178602044 | chr2:179466773;179466772;179466771 |
Novex-1 | 9469 | 28630;28631;28632 | chr2:178602046;178602045;178602044 | chr2:179466773;179466772;179466771 |
Novex-2 | 9536 | 28831;28832;28833 | chr2:178602046;178602045;178602044 | chr2:179466773;179466772;179466771 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.928 | N | 0.538 | 0.29 | 0.356484672536 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3104 | likely_benign | 0.3128 | benign | 0.004 | Stabilizing | 0.944 | D | 0.605 | neutral | None | None | None | None | N |
K/C | 0.6479 | likely_pathogenic | 0.6785 | pathogenic | -0.212 | Destabilizing | 0.999 | D | 0.745 | deleterious | None | None | None | None | N |
K/D | 0.614 | likely_pathogenic | 0.6418 | pathogenic | 0.208 | Stabilizing | 0.983 | D | 0.73 | prob.delet. | None | None | None | None | N |
K/E | 0.1964 | likely_benign | 0.2033 | benign | 0.222 | Stabilizing | 0.928 | D | 0.538 | neutral | N | 0.449382155 | None | None | N |
K/F | 0.7095 | likely_pathogenic | 0.7273 | pathogenic | -0.191 | Destabilizing | 0.999 | D | 0.721 | prob.delet. | None | None | None | None | N |
K/G | 0.5156 | ambiguous | 0.5243 | ambiguous | -0.202 | Destabilizing | 0.983 | D | 0.628 | neutral | None | None | None | None | N |
K/H | 0.3283 | likely_benign | 0.3349 | benign | -0.503 | Destabilizing | 0.998 | D | 0.705 | prob.neutral | None | None | None | None | N |
K/I | 0.2529 | likely_benign | 0.2585 | benign | 0.469 | Stabilizing | 0.989 | D | 0.747 | deleterious | N | 0.515359218 | None | None | N |
K/L | 0.3459 | ambiguous | 0.3472 | ambiguous | 0.469 | Stabilizing | 0.983 | D | 0.628 | neutral | None | None | None | None | N |
K/M | 0.249 | likely_benign | 0.255 | benign | 0.235 | Stabilizing | 0.999 | D | 0.711 | prob.delet. | None | None | None | None | N |
K/N | 0.4457 | ambiguous | 0.4703 | ambiguous | 0.237 | Stabilizing | 0.978 | D | 0.651 | neutral | N | 0.500928483 | None | None | N |
K/P | 0.8496 | likely_pathogenic | 0.858 | pathogenic | 0.343 | Stabilizing | 0.997 | D | 0.741 | deleterious | None | None | None | None | N |
K/Q | 0.1388 | likely_benign | 0.1395 | benign | 0.087 | Stabilizing | 0.978 | D | 0.636 | neutral | N | 0.492615644 | None | None | N |
K/R | 0.0879 | likely_benign | 0.0901 | benign | -0.051 | Destabilizing | 0.085 | N | 0.279 | neutral | N | 0.519340885 | None | None | N |
K/S | 0.3916 | ambiguous | 0.3991 | ambiguous | -0.273 | Destabilizing | 0.944 | D | 0.609 | neutral | None | None | None | None | N |
K/T | 0.1482 | likely_benign | 0.1521 | benign | -0.104 | Destabilizing | 0.978 | D | 0.689 | prob.neutral | N | 0.469354782 | None | None | N |
K/V | 0.2188 | likely_benign | 0.225 | benign | 0.343 | Stabilizing | 0.992 | D | 0.73 | prob.delet. | None | None | None | None | N |
K/W | 0.7845 | likely_pathogenic | 0.7942 | pathogenic | -0.205 | Destabilizing | 0.999 | D | 0.746 | deleterious | None | None | None | None | N |
K/Y | 0.6277 | likely_pathogenic | 0.6474 | pathogenic | 0.154 | Stabilizing | 0.997 | D | 0.736 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.