Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18431 | 55516;55517;55518 | chr2:178601893;178601892;178601891 | chr2:179466620;179466619;179466618 |
N2AB | 16790 | 50593;50594;50595 | chr2:178601893;178601892;178601891 | chr2:179466620;179466619;179466618 |
N2A | 15863 | 47812;47813;47814 | chr2:178601893;178601892;178601891 | chr2:179466620;179466619;179466618 |
N2B | 9366 | 28321;28322;28323 | chr2:178601893;178601892;178601891 | chr2:179466620;179466619;179466618 |
Novex-1 | 9491 | 28696;28697;28698 | chr2:178601893;178601892;178601891 | chr2:179466620;179466619;179466618 |
Novex-2 | 9558 | 28897;28898;28899 | chr2:178601893;178601892;178601891 | chr2:179466620;179466619;179466618 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs756341923 | 0.517 | 0.986 | N | 0.473 | 0.219 | 0.305410167561 | gnomAD-2.1.1 | 1.22E-05 | None | None | None | None | N | None | 0 | 0 | None | 1.0008E-04 | 0 | None | 0 | None | 0 | 1.79E-05 | 0 |
E/K | rs756341923 | 0.517 | 0.986 | N | 0.473 | 0.219 | 0.305410167561 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/K | rs756341923 | 0.517 | 0.986 | N | 0.473 | 0.219 | 0.305410167561 | gnomAD-4.0.0 | 9.30744E-06 | None | None | None | None | N | None | 2.67401E-05 | 0 | None | 6.77002E-05 | 0 | None | 0 | 0 | 8.48163E-06 | 0 | 1.60369E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1025 | likely_benign | 0.0942 | benign | -0.354 | Destabilizing | 0.961 | D | 0.497 | neutral | N | 0.477565181 | None | None | N |
E/C | 0.747 | likely_pathogenic | 0.6942 | pathogenic | 0.007 | Stabilizing | 1.0 | D | 0.599 | neutral | None | None | None | None | N |
E/D | 0.1085 | likely_benign | 0.1063 | benign | -0.346 | Destabilizing | 0.91 | D | 0.431 | neutral | N | 0.433811617 | None | None | N |
E/F | 0.6835 | likely_pathogenic | 0.6387 | pathogenic | -0.272 | Destabilizing | 0.999 | D | 0.532 | neutral | None | None | None | None | N |
E/G | 0.1339 | likely_benign | 0.1335 | benign | -0.563 | Destabilizing | 0.98 | D | 0.469 | neutral | N | 0.429960448 | None | None | N |
E/H | 0.4168 | ambiguous | 0.3855 | ambiguous | -0.133 | Destabilizing | 0.996 | D | 0.469 | neutral | None | None | None | None | N |
E/I | 0.2538 | likely_benign | 0.2077 | benign | 0.162 | Stabilizing | 0.999 | D | 0.535 | neutral | None | None | None | None | N |
E/K | 0.1166 | likely_benign | 0.1185 | benign | 0.255 | Stabilizing | 0.986 | D | 0.473 | neutral | N | 0.450186579 | None | None | N |
E/L | 0.2968 | likely_benign | 0.2526 | benign | 0.162 | Stabilizing | 0.996 | D | 0.465 | neutral | None | None | None | None | N |
E/M | 0.3672 | ambiguous | 0.3209 | benign | 0.292 | Stabilizing | 1.0 | D | 0.516 | neutral | None | None | None | None | N |
E/N | 0.22 | likely_benign | 0.2008 | benign | 0.007 | Stabilizing | 0.996 | D | 0.425 | neutral | None | None | None | None | N |
E/P | 0.3615 | ambiguous | 0.3726 | ambiguous | 0.01 | Stabilizing | 0.092 | N | 0.259 | neutral | None | None | None | None | N |
E/Q | 0.1323 | likely_benign | 0.1272 | benign | 0.04 | Stabilizing | 0.709 | D | 0.241 | neutral | N | 0.496767017 | None | None | N |
E/R | 0.2248 | likely_benign | 0.2258 | benign | 0.437 | Stabilizing | 0.97 | D | 0.431 | neutral | None | None | None | None | N |
E/S | 0.1428 | likely_benign | 0.134 | benign | -0.18 | Destabilizing | 0.97 | D | 0.449 | neutral | None | None | None | None | N |
E/T | 0.1611 | likely_benign | 0.1411 | benign | -0.015 | Destabilizing | 0.985 | D | 0.469 | neutral | None | None | None | None | N |
E/V | 0.1521 | likely_benign | 0.1302 | benign | 0.01 | Stabilizing | 0.994 | D | 0.437 | neutral | N | 0.42015446 | None | None | N |
E/W | 0.8334 | likely_pathogenic | 0.8247 | pathogenic | -0.145 | Destabilizing | 1.0 | D | 0.614 | neutral | None | None | None | None | N |
E/Y | 0.5558 | ambiguous | 0.5154 | ambiguous | -0.036 | Destabilizing | 0.999 | D | 0.517 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.