Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18434 | 55525;55526;55527 | chr2:178601884;178601883;178601882 | chr2:179466611;179466610;179466609 |
N2AB | 16793 | 50602;50603;50604 | chr2:178601884;178601883;178601882 | chr2:179466611;179466610;179466609 |
N2A | 15866 | 47821;47822;47823 | chr2:178601884;178601883;178601882 | chr2:179466611;179466610;179466609 |
N2B | 9369 | 28330;28331;28332 | chr2:178601884;178601883;178601882 | chr2:179466611;179466610;179466609 |
Novex-1 | 9494 | 28705;28706;28707 | chr2:178601884;178601883;178601882 | chr2:179466611;179466610;179466609 |
Novex-2 | 9561 | 28906;28907;28908 | chr2:178601884;178601883;178601882 | chr2:179466611;179466610;179466609 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/E | None | None | 0.309 | N | 0.435 | 0.074 | 0.222439326576 | gnomAD-4.0.0 | 1.59882E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8665E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2017 | likely_benign | 0.1903 | benign | -0.476 | Destabilizing | 0.373 | N | 0.456 | neutral | None | None | None | None | N |
Q/C | 0.4772 | ambiguous | 0.4444 | ambiguous | 0.009 | Stabilizing | 0.996 | D | 0.487 | neutral | None | None | None | None | N |
Q/D | 0.3276 | likely_benign | 0.3431 | ambiguous | -0.381 | Destabilizing | 0.742 | D | 0.488 | neutral | None | None | None | None | N |
Q/E | 0.0921 | likely_benign | 0.0905 | benign | -0.302 | Destabilizing | 0.309 | N | 0.435 | neutral | N | 0.441898822 | None | None | N |
Q/F | 0.4729 | ambiguous | 0.4322 | ambiguous | -0.164 | Destabilizing | 0.91 | D | 0.497 | neutral | None | None | None | None | N |
Q/G | 0.306 | likely_benign | 0.2979 | benign | -0.816 | Destabilizing | 0.742 | D | 0.507 | neutral | None | None | None | None | N |
Q/H | 0.1527 | likely_benign | 0.1442 | benign | -0.641 | Destabilizing | 0.939 | D | 0.549 | neutral | N | 0.486287104 | None | None | N |
Q/I | 0.189 | likely_benign | 0.1727 | benign | 0.38 | Stabilizing | 0.59 | D | 0.495 | neutral | None | None | None | None | N |
Q/K | 0.0846 | likely_benign | 0.0845 | benign | -0.407 | Destabilizing | 0.003 | N | 0.218 | neutral | N | 0.474893888 | None | None | N |
Q/L | 0.1002 | likely_benign | 0.0945 | benign | 0.38 | Stabilizing | 0.309 | N | 0.467 | neutral | N | 0.512164197 | None | None | N |
Q/M | 0.2541 | likely_benign | 0.2348 | benign | 0.631 | Stabilizing | 0.953 | D | 0.554 | neutral | None | None | None | None | N |
Q/N | 0.2492 | likely_benign | 0.2383 | benign | -0.896 | Destabilizing | 0.742 | D | 0.509 | neutral | None | None | None | None | N |
Q/P | 0.4575 | ambiguous | 0.508 | ambiguous | 0.127 | Stabilizing | 0.815 | D | 0.527 | neutral | D | 0.523805343 | None | None | N |
Q/R | 0.0983 | likely_benign | 0.0967 | benign | -0.339 | Destabilizing | 0.521 | D | 0.493 | neutral | N | 0.467583914 | None | None | N |
Q/S | 0.2014 | likely_benign | 0.1916 | benign | -0.93 | Destabilizing | 0.543 | D | 0.491 | neutral | None | None | None | None | N |
Q/T | 0.1327 | likely_benign | 0.1255 | benign | -0.666 | Destabilizing | 0.742 | D | 0.509 | neutral | None | None | None | None | N |
Q/V | 0.1289 | likely_benign | 0.1195 | benign | 0.127 | Stabilizing | 0.009 | N | 0.299 | neutral | None | None | None | None | N |
Q/W | 0.4362 | ambiguous | 0.4286 | ambiguous | -0.089 | Destabilizing | 0.996 | D | 0.509 | neutral | None | None | None | None | N |
Q/Y | 0.3393 | likely_benign | 0.317 | benign | 0.125 | Stabilizing | 0.953 | D | 0.545 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.