Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18445 | 55558;55559;55560 | chr2:178601757;178601756;178601755 | chr2:179466484;179466483;179466482 |
N2AB | 16804 | 50635;50636;50637 | chr2:178601757;178601756;178601755 | chr2:179466484;179466483;179466482 |
N2A | 15877 | 47854;47855;47856 | chr2:178601757;178601756;178601755 | chr2:179466484;179466483;179466482 |
N2B | 9380 | 28363;28364;28365 | chr2:178601757;178601756;178601755 | chr2:179466484;179466483;179466482 |
Novex-1 | 9505 | 28738;28739;28740 | chr2:178601757;178601756;178601755 | chr2:179466484;179466483;179466482 |
Novex-2 | 9572 | 28939;28940;28941 | chr2:178601757;178601756;178601755 | chr2:179466484;179466483;179466482 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | None | None | None | N | 0.231 | 0.072 | 0.319970858106 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.3142 | likely_benign | 0.3321 | benign | -2.664 | Highly Destabilizing | 0.055 | N | 0.445 | neutral | None | None | None | None | N |
I/C | 0.5652 | likely_pathogenic | 0.5413 | ambiguous | -1.884 | Destabilizing | 0.883 | D | 0.564 | neutral | None | None | None | None | N |
I/D | 0.6774 | likely_pathogenic | 0.7137 | pathogenic | -3.072 | Highly Destabilizing | 0.124 | N | 0.572 | neutral | None | None | None | None | N |
I/E | 0.5086 | ambiguous | 0.5321 | ambiguous | -2.936 | Highly Destabilizing | 0.22 | N | 0.573 | neutral | None | None | None | None | N |
I/F | 0.1691 | likely_benign | 0.1609 | benign | -1.617 | Destabilizing | 0.427 | N | 0.556 | neutral | N | 0.475627394 | None | None | N |
I/G | 0.678 | likely_pathogenic | 0.6814 | pathogenic | -3.1 | Highly Destabilizing | 0.22 | N | 0.564 | neutral | None | None | None | None | N |
I/H | 0.3781 | ambiguous | 0.3894 | ambiguous | -2.414 | Highly Destabilizing | 0.667 | D | 0.615 | neutral | None | None | None | None | N |
I/K | 0.3588 | ambiguous | 0.3963 | ambiguous | -2.189 | Highly Destabilizing | 0.22 | N | 0.571 | neutral | None | None | None | None | N |
I/L | 0.1199 | likely_benign | 0.1153 | benign | -1.428 | Destabilizing | 0.019 | N | 0.392 | neutral | N | 0.470701577 | None | None | N |
I/M | 0.1118 | likely_benign | 0.1101 | benign | -1.315 | Destabilizing | 0.427 | N | 0.566 | neutral | N | 0.503179354 | None | None | N |
I/N | 0.2216 | likely_benign | 0.2425 | benign | -2.298 | Highly Destabilizing | 0.003 | N | 0.533 | neutral | N | 0.521938473 | None | None | N |
I/P | 0.961 | likely_pathogenic | 0.9698 | pathogenic | -1.821 | Destabilizing | 0.667 | D | 0.631 | neutral | None | None | None | None | N |
I/Q | 0.3857 | ambiguous | 0.4016 | ambiguous | -2.323 | Highly Destabilizing | 0.667 | D | 0.631 | neutral | None | None | None | None | N |
I/R | 0.2694 | likely_benign | 0.3052 | benign | -1.628 | Destabilizing | 0.497 | N | 0.632 | neutral | None | None | None | None | N |
I/S | 0.2187 | likely_benign | 0.2347 | benign | -2.883 | Highly Destabilizing | 0.042 | N | 0.532 | neutral | N | 0.468989423 | None | None | N |
I/T | 0.1284 | likely_benign | 0.1377 | benign | -2.64 | Highly Destabilizing | 0.001 | N | 0.355 | neutral | N | 0.405801949 | None | None | N |
I/V | 0.0763 | likely_benign | 0.0718 | benign | -1.821 | Destabilizing | None | N | 0.231 | neutral | N | 0.448806152 | None | None | N |
I/W | 0.7447 | likely_pathogenic | 0.721 | pathogenic | -1.939 | Destabilizing | 0.958 | D | 0.647 | neutral | None | None | None | None | N |
I/Y | 0.3955 | ambiguous | 0.4026 | ambiguous | -1.748 | Destabilizing | 0.667 | D | 0.587 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.