Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18490 | 55693;55694;55695 | chr2:178601529;178601528;178601527 | chr2:179466256;179466255;179466254 |
N2AB | 16849 | 50770;50771;50772 | chr2:178601529;178601528;178601527 | chr2:179466256;179466255;179466254 |
N2A | 15922 | 47989;47990;47991 | chr2:178601529;178601528;178601527 | chr2:179466256;179466255;179466254 |
N2B | 9425 | 28498;28499;28500 | chr2:178601529;178601528;178601527 | chr2:179466256;179466255;179466254 |
Novex-1 | 9550 | 28873;28874;28875 | chr2:178601529;178601528;178601527 | chr2:179466256;179466255;179466254 |
Novex-2 | 9617 | 29074;29075;29076 | chr2:178601529;178601528;178601527 | chr2:179466256;179466255;179466254 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | None | None | 0.067 | N | 0.247 | 0.089 | 0.119812018005 | gnomAD-4.0.0 | 1.59384E-06 | None | None | None | None | N | None | 0 | 2.28791E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.6055 | likely_pathogenic | 0.5948 | pathogenic | -0.231 | Destabilizing | 0.988 | D | 0.661 | neutral | N | 0.518345516 | None | None | N |
D/C | 0.9247 | likely_pathogenic | 0.925 | pathogenic | 0.073 | Stabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | N |
D/E | 0.3499 | ambiguous | 0.2904 | benign | -0.27 | Destabilizing | 0.067 | N | 0.247 | neutral | N | 0.461278725 | None | None | N |
D/F | 0.9362 | likely_pathogenic | 0.9398 | pathogenic | -0.192 | Destabilizing | 1.0 | D | 0.678 | prob.neutral | None | None | None | None | N |
D/G | 0.5961 | likely_pathogenic | 0.577 | pathogenic | -0.412 | Destabilizing | 0.958 | D | 0.721 | prob.delet. | N | 0.471711179 | None | None | N |
D/H | 0.7841 | likely_pathogenic | 0.7638 | pathogenic | 0.026 | Stabilizing | 0.998 | D | 0.682 | prob.neutral | N | 0.485918322 | None | None | N |
D/I | 0.9031 | likely_pathogenic | 0.911 | pathogenic | 0.194 | Stabilizing | 0.995 | D | 0.737 | prob.delet. | None | None | None | None | N |
D/K | 0.8906 | likely_pathogenic | 0.8736 | pathogenic | 0.431 | Stabilizing | 0.982 | D | 0.703 | prob.neutral | None | None | None | None | N |
D/L | 0.8604 | likely_pathogenic | 0.8691 | pathogenic | 0.194 | Stabilizing | 0.991 | D | 0.724 | prob.delet. | None | None | None | None | N |
D/M | 0.9283 | likely_pathogenic | 0.9343 | pathogenic | 0.295 | Stabilizing | 1.0 | D | 0.661 | neutral | None | None | None | None | N |
D/N | 0.279 | likely_benign | 0.2626 | benign | 0.093 | Stabilizing | 0.988 | D | 0.672 | neutral | N | 0.503184062 | None | None | N |
D/P | 0.9844 | likely_pathogenic | 0.9871 | pathogenic | 0.074 | Stabilizing | 0.995 | D | 0.753 | deleterious | None | None | None | None | N |
D/Q | 0.7815 | likely_pathogenic | 0.7537 | pathogenic | 0.126 | Stabilizing | 0.982 | D | 0.717 | prob.delet. | None | None | None | None | N |
D/R | 0.8913 | likely_pathogenic | 0.8872 | pathogenic | 0.57 | Stabilizing | 0.991 | D | 0.691 | prob.neutral | None | None | None | None | N |
D/S | 0.4593 | ambiguous | 0.4409 | ambiguous | 0.012 | Stabilizing | 0.968 | D | 0.65 | neutral | None | None | None | None | N |
D/T | 0.7456 | likely_pathogenic | 0.749 | pathogenic | 0.157 | Stabilizing | 0.991 | D | 0.744 | deleterious | None | None | None | None | N |
D/V | 0.7728 | likely_pathogenic | 0.7852 | pathogenic | 0.074 | Stabilizing | 0.994 | D | 0.737 | prob.delet. | N | 0.490575903 | None | None | N |
D/W | 0.9871 | likely_pathogenic | 0.9874 | pathogenic | -0.07 | Destabilizing | 1.0 | D | 0.673 | neutral | None | None | None | None | N |
D/Y | 0.7114 | likely_pathogenic | 0.7246 | pathogenic | 0.047 | Stabilizing | 0.999 | D | 0.679 | prob.neutral | N | 0.505833002 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.