Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1851 | 5776;5777;5778 | chr2:178776313;178776312;178776311 | chr2:179641040;179641039;179641038 |
N2AB | 1851 | 5776;5777;5778 | chr2:178776313;178776312;178776311 | chr2:179641040;179641039;179641038 |
N2A | 1851 | 5776;5777;5778 | chr2:178776313;178776312;178776311 | chr2:179641040;179641039;179641038 |
N2B | 1805 | 5638;5639;5640 | chr2:178776313;178776312;178776311 | chr2:179641040;179641039;179641038 |
Novex-1 | 1805 | 5638;5639;5640 | chr2:178776313;178776312;178776311 | chr2:179641040;179641039;179641038 |
Novex-2 | 1805 | 5638;5639;5640 | chr2:178776313;178776312;178776311 | chr2:179641040;179641039;179641038 |
Novex-3 | 1851 | 5776;5777;5778 | chr2:178776313;178776312;178776311 | chr2:179641040;179641039;179641038 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/T | None | None | 1.0 | N | 0.711 | 0.516 | 0.453772157364 | gnomAD-4.0.0 | 9.60257E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.05E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.6139 | likely_pathogenic | 0.5796 | pathogenic | -0.134 | Destabilizing | 0.999 | D | 0.615 | neutral | None | None | None | None | N |
R/C | 0.3793 | ambiguous | 0.3551 | ambiguous | -0.267 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
R/D | 0.8694 | likely_pathogenic | 0.8689 | pathogenic | 0.017 | Stabilizing | 1.0 | D | 0.714 | prob.delet. | None | None | None | None | N |
R/E | 0.6099 | likely_pathogenic | 0.5866 | pathogenic | 0.111 | Stabilizing | 0.999 | D | 0.655 | neutral | None | None | None | None | N |
R/F | 0.7968 | likely_pathogenic | 0.7848 | pathogenic | -0.16 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
R/G | 0.6142 | likely_pathogenic | 0.5838 | pathogenic | -0.385 | Destabilizing | 1.0 | D | 0.661 | neutral | D | 0.533013696 | None | None | N |
R/H | 0.1693 | likely_benign | 0.1586 | benign | -0.792 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
R/I | 0.5044 | ambiguous | 0.477 | ambiguous | 0.508 | Stabilizing | 1.0 | D | 0.729 | prob.delet. | N | 0.499314787 | None | None | N |
R/K | 0.1521 | likely_benign | 0.1428 | benign | -0.218 | Destabilizing | 0.997 | D | 0.555 | neutral | N | 0.50237116 | None | None | N |
R/L | 0.4605 | ambiguous | 0.4183 | ambiguous | 0.508 | Stabilizing | 1.0 | D | 0.661 | neutral | None | None | None | None | N |
R/M | 0.5328 | ambiguous | 0.4878 | ambiguous | 0.011 | Stabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
R/N | 0.7678 | likely_pathogenic | 0.769 | pathogenic | 0.08 | Stabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | N |
R/P | 0.917 | likely_pathogenic | 0.917 | pathogenic | 0.316 | Stabilizing | 1.0 | D | 0.694 | prob.neutral | None | None | None | None | N |
R/Q | 0.1828 | likely_benign | 0.1671 | benign | -0.017 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
R/S | 0.6898 | likely_pathogenic | 0.6711 | pathogenic | -0.387 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | N | 0.488826372 | None | None | N |
R/T | 0.4059 | ambiguous | 0.3652 | ambiguous | -0.137 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | N | 0.467020121 | None | None | N |
R/V | 0.5158 | ambiguous | 0.4851 | ambiguous | 0.316 | Stabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
R/W | 0.4485 | ambiguous | 0.4046 | ambiguous | -0.077 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
R/Y | 0.6651 | likely_pathogenic | 0.6604 | pathogenic | 0.291 | Stabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.