Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1852 | 5779;5780;5781 | chr2:178776310;178776309;178776308 | chr2:179641037;179641036;179641035 |
N2AB | 1852 | 5779;5780;5781 | chr2:178776310;178776309;178776308 | chr2:179641037;179641036;179641035 |
N2A | 1852 | 5779;5780;5781 | chr2:178776310;178776309;178776308 | chr2:179641037;179641036;179641035 |
N2B | 1806 | 5641;5642;5643 | chr2:178776310;178776309;178776308 | chr2:179641037;179641036;179641035 |
Novex-1 | 1806 | 5641;5642;5643 | chr2:178776310;178776309;178776308 | chr2:179641037;179641036;179641035 |
Novex-2 | 1806 | 5641;5642;5643 | chr2:178776310;178776309;178776308 | chr2:179641037;179641036;179641035 |
Novex-3 | 1852 | 5779;5780;5781 | chr2:178776310;178776309;178776308 | chr2:179641037;179641036;179641035 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.997 | D | 0.466 | 0.417 | 0.774770343904 | gnomAD-4.0.0 | 6.84119E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99306E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6319 | likely_pathogenic | 0.7172 | pathogenic | -1.768 | Destabilizing | 0.999 | D | 0.478 | neutral | N | 0.518150283 | None | None | N |
V/C | 0.8982 | likely_pathogenic | 0.9182 | pathogenic | -1.159 | Destabilizing | 1.0 | D | 0.668 | neutral | None | None | None | None | N |
V/D | 0.9881 | likely_pathogenic | 0.9936 | pathogenic | -1.725 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
V/E | 0.9603 | likely_pathogenic | 0.9756 | pathogenic | -1.671 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | D | 0.68859566 | None | None | N |
V/F | 0.7878 | likely_pathogenic | 0.8585 | pathogenic | -1.189 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
V/G | 0.7835 | likely_pathogenic | 0.841 | pathogenic | -2.15 | Highly Destabilizing | 1.0 | D | 0.718 | prob.delet. | D | 0.622406438 | None | None | N |
V/H | 0.9832 | likely_pathogenic | 0.99 | pathogenic | -1.676 | Destabilizing | 1.0 | D | 0.674 | neutral | None | None | None | None | N |
V/I | 0.1323 | likely_benign | 0.152 | benign | -0.785 | Destabilizing | 0.997 | D | 0.466 | neutral | D | 0.545862481 | None | None | N |
V/K | 0.9608 | likely_pathogenic | 0.974 | pathogenic | -1.461 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
V/L | 0.6134 | likely_pathogenic | 0.6852 | pathogenic | -0.785 | Destabilizing | 0.997 | D | 0.491 | neutral | D | 0.579797902 | None | None | N |
V/M | 0.5901 | likely_pathogenic | 0.6948 | pathogenic | -0.631 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
V/N | 0.9518 | likely_pathogenic | 0.9738 | pathogenic | -1.317 | Destabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | N |
V/P | 0.9897 | likely_pathogenic | 0.9921 | pathogenic | -1.08 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
V/Q | 0.9431 | likely_pathogenic | 0.9654 | pathogenic | -1.429 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | N |
V/R | 0.9488 | likely_pathogenic | 0.9637 | pathogenic | -0.985 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | N |
V/S | 0.8339 | likely_pathogenic | 0.895 | pathogenic | -1.891 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
V/T | 0.6572 | likely_pathogenic | 0.7411 | pathogenic | -1.726 | Destabilizing | 0.999 | D | 0.62 | neutral | None | None | None | None | N |
V/W | 0.9959 | likely_pathogenic | 0.9975 | pathogenic | -1.451 | Destabilizing | 1.0 | D | 0.644 | neutral | None | None | None | None | N |
V/Y | 0.9772 | likely_pathogenic | 0.9851 | pathogenic | -1.161 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.