Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18537 | 55834;55835;55836 | chr2:178601388;178601387;178601386 | chr2:179466115;179466114;179466113 |
N2AB | 16896 | 50911;50912;50913 | chr2:178601388;178601387;178601386 | chr2:179466115;179466114;179466113 |
N2A | 15969 | 48130;48131;48132 | chr2:178601388;178601387;178601386 | chr2:179466115;179466114;179466113 |
N2B | 9472 | 28639;28640;28641 | chr2:178601388;178601387;178601386 | chr2:179466115;179466114;179466113 |
Novex-1 | 9597 | 29014;29015;29016 | chr2:178601388;178601387;178601386 | chr2:179466115;179466114;179466113 |
Novex-2 | 9664 | 29215;29216;29217 | chr2:178601388;178601387;178601386 | chr2:179466115;179466114;179466113 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | None | N | 0.139 | 0.162 | 0.0551355673512 | gnomAD-4.0.0 | 1.5935E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86166E-06 | 0 | 0 |
T/I | rs1027035888 | -0.189 | 0.055 | N | 0.369 | 0.21 | 0.288727942641 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 6.47E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
T/I | rs1027035888 | -0.189 | 0.055 | N | 0.369 | 0.21 | 0.288727942641 | gnomAD-4.0.0 | 1.59355E-06 | None | None | None | None | N | None | 5.67022E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0732 | likely_benign | 0.0813 | benign | -1.015 | Destabilizing | None | N | 0.139 | neutral | N | 0.443138468 | None | None | N |
T/C | 0.3294 | likely_benign | 0.3673 | ambiguous | -0.511 | Destabilizing | 0.356 | N | 0.477 | neutral | None | None | None | None | N |
T/D | 0.551 | ambiguous | 0.5762 | pathogenic | 0.144 | Stabilizing | 0.016 | N | 0.355 | neutral | None | None | None | None | N |
T/E | 0.5609 | ambiguous | 0.5719 | pathogenic | 0.196 | Stabilizing | 0.016 | N | 0.371 | neutral | None | None | None | None | N |
T/F | 0.2821 | likely_benign | 0.3153 | benign | -1.011 | Destabilizing | 0.356 | N | 0.585 | neutral | None | None | None | None | N |
T/G | 0.1767 | likely_benign | 0.1925 | benign | -1.311 | Destabilizing | 0.007 | N | 0.369 | neutral | None | None | None | None | N |
T/H | 0.3123 | likely_benign | 0.3206 | benign | -1.396 | Destabilizing | 0.356 | N | 0.495 | neutral | None | None | None | None | N |
T/I | 0.2051 | likely_benign | 0.2388 | benign | -0.3 | Destabilizing | 0.055 | N | 0.369 | neutral | N | 0.493740647 | None | None | N |
T/K | 0.5526 | ambiguous | 0.5931 | pathogenic | -0.472 | Destabilizing | 0.012 | N | 0.365 | neutral | N | 0.459203999 | None | None | N |
T/L | 0.1274 | likely_benign | 0.1441 | benign | -0.3 | Destabilizing | 0.016 | N | 0.376 | neutral | None | None | None | None | N |
T/M | 0.1182 | likely_benign | 0.1298 | benign | -0.151 | Destabilizing | 0.628 | D | 0.477 | neutral | None | None | None | None | N |
T/N | 0.126 | likely_benign | 0.131 | benign | -0.553 | Destabilizing | 0.016 | N | 0.277 | neutral | None | None | None | None | N |
T/P | 0.6073 | likely_pathogenic | 0.7188 | pathogenic | -0.506 | Destabilizing | 0.055 | N | 0.373 | neutral | N | 0.503264207 | None | None | N |
T/Q | 0.3363 | likely_benign | 0.344 | ambiguous | -0.59 | Destabilizing | 0.072 | N | 0.407 | neutral | None | None | None | None | N |
T/R | 0.4921 | ambiguous | 0.5544 | ambiguous | -0.346 | Destabilizing | 0.055 | N | 0.415 | neutral | N | 0.443618471 | None | None | N |
T/S | 0.0699 | likely_benign | 0.0698 | benign | -0.948 | Destabilizing | None | N | 0.136 | neutral | N | 0.37169687 | None | None | N |
T/V | 0.1377 | likely_benign | 0.157 | benign | -0.506 | Destabilizing | 0.016 | N | 0.307 | neutral | None | None | None | None | N |
T/W | 0.6994 | likely_pathogenic | 0.7382 | pathogenic | -0.935 | Destabilizing | 0.864 | D | 0.5 | neutral | None | None | None | None | N |
T/Y | 0.3215 | likely_benign | 0.3442 | ambiguous | -0.682 | Destabilizing | 0.356 | N | 0.575 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.