Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18541 | 55846;55847;55848 | chr2:178601376;178601375;178601374 | chr2:179466103;179466102;179466101 |
N2AB | 16900 | 50923;50924;50925 | chr2:178601376;178601375;178601374 | chr2:179466103;179466102;179466101 |
N2A | 15973 | 48142;48143;48144 | chr2:178601376;178601375;178601374 | chr2:179466103;179466102;179466101 |
N2B | 9476 | 28651;28652;28653 | chr2:178601376;178601375;178601374 | chr2:179466103;179466102;179466101 |
Novex-1 | 9601 | 29026;29027;29028 | chr2:178601376;178601375;178601374 | chr2:179466103;179466102;179466101 |
Novex-2 | 9668 | 29227;29228;29229 | chr2:178601376;178601375;178601374 | chr2:179466103;179466102;179466101 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | rs749140088 | None | 0.984 | N | 0.597 | 0.31 | 0.349870743963 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1385 | likely_benign | 0.163 | benign | -1.037 | Destabilizing | 0.984 | D | 0.597 | neutral | N | 0.455584903 | None | None | N |
P/C | 0.6702 | likely_pathogenic | 0.7498 | pathogenic | -0.923 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
P/D | 0.5946 | likely_pathogenic | 0.6611 | pathogenic | -0.402 | Destabilizing | 0.998 | D | 0.745 | deleterious | None | None | None | None | N |
P/E | 0.4101 | ambiguous | 0.4675 | ambiguous | -0.41 | Destabilizing | 0.998 | D | 0.743 | deleterious | None | None | None | None | N |
P/F | 0.7894 | likely_pathogenic | 0.8351 | pathogenic | -0.744 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
P/G | 0.3263 | likely_benign | 0.3955 | ambiguous | -1.315 | Destabilizing | 0.994 | D | 0.709 | prob.delet. | None | None | None | None | N |
P/H | 0.3289 | likely_benign | 0.3768 | ambiguous | -0.641 | Destabilizing | 1.0 | D | 0.833 | deleterious | N | 0.476402893 | None | None | N |
P/I | 0.641 | likely_pathogenic | 0.7121 | pathogenic | -0.395 | Destabilizing | 0.999 | D | 0.874 | deleterious | None | None | None | None | N |
P/K | 0.3858 | ambiguous | 0.4629 | ambiguous | -0.822 | Destabilizing | 0.998 | D | 0.733 | prob.delet. | None | None | None | None | N |
P/L | 0.2583 | likely_benign | 0.3001 | benign | -0.395 | Destabilizing | 0.999 | D | 0.826 | deleterious | N | 0.463820385 | None | None | N |
P/M | 0.5048 | ambiguous | 0.582 | pathogenic | -0.508 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
P/N | 0.4032 | ambiguous | 0.4666 | ambiguous | -0.704 | Destabilizing | 0.998 | D | 0.842 | deleterious | None | None | None | None | N |
P/Q | 0.2439 | likely_benign | 0.2871 | benign | -0.814 | Destabilizing | 0.999 | D | 0.845 | deleterious | None | None | None | None | N |
P/R | 0.2995 | likely_benign | 0.344 | ambiguous | -0.351 | Destabilizing | 0.999 | D | 0.864 | deleterious | N | 0.453005958 | None | None | N |
P/S | 0.1722 | likely_benign | 0.2059 | benign | -1.259 | Destabilizing | 0.916 | D | 0.303 | neutral | N | 0.408695034 | None | None | N |
P/T | 0.1546 | likely_benign | 0.1867 | benign | -1.14 | Destabilizing | 0.995 | D | 0.742 | deleterious | N | 0.389069123 | None | None | N |
P/V | 0.4313 | ambiguous | 0.5073 | ambiguous | -0.573 | Destabilizing | 0.999 | D | 0.807 | deleterious | None | None | None | None | N |
P/W | 0.8302 | likely_pathogenic | 0.8731 | pathogenic | -0.862 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
P/Y | 0.7025 | likely_pathogenic | 0.7672 | pathogenic | -0.572 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.