Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18567 | 55924;55925;55926 | chr2:178601298;178601297;178601296 | chr2:179466025;179466024;179466023 |
N2AB | 16926 | 51001;51002;51003 | chr2:178601298;178601297;178601296 | chr2:179466025;179466024;179466023 |
N2A | 15999 | 48220;48221;48222 | chr2:178601298;178601297;178601296 | chr2:179466025;179466024;179466023 |
N2B | 9502 | 28729;28730;28731 | chr2:178601298;178601297;178601296 | chr2:179466025;179466024;179466023 |
Novex-1 | 9627 | 29104;29105;29106 | chr2:178601298;178601297;178601296 | chr2:179466025;179466024;179466023 |
Novex-2 | 9694 | 29305;29306;29307 | chr2:178601298;178601297;178601296 | chr2:179466025;179466024;179466023 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | rs773703444 | -0.805 | 0.997 | N | 0.675 | 0.162 | 0.208816687407 | gnomAD-2.1.1 | 4.3E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.36E-06 | 0 |
T/S | rs773703444 | -0.805 | 0.997 | N | 0.675 | 0.162 | 0.208816687407 | gnomAD-4.0.0 | 1.65949E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.96665E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.6577 | likely_pathogenic | 0.5865 | pathogenic | -0.791 | Destabilizing | 0.997 | D | 0.678 | prob.neutral | N | 0.496639305 | None | None | N |
T/C | 0.9056 | likely_pathogenic | 0.9087 | pathogenic | -0.246 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
T/D | 0.9636 | likely_pathogenic | 0.9476 | pathogenic | 0.268 | Stabilizing | 0.999 | D | 0.875 | deleterious | None | None | None | None | N |
T/E | 0.971 | likely_pathogenic | 0.9542 | pathogenic | 0.402 | Stabilizing | 0.999 | D | 0.87 | deleterious | None | None | None | None | N |
T/F | 0.9586 | likely_pathogenic | 0.9404 | pathogenic | -0.574 | Destabilizing | 0.999 | D | 0.891 | deleterious | None | None | None | None | N |
T/G | 0.822 | likely_pathogenic | 0.7882 | pathogenic | -1.146 | Destabilizing | 0.999 | D | 0.819 | deleterious | None | None | None | None | N |
T/H | 0.9654 | likely_pathogenic | 0.9532 | pathogenic | -1.119 | Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
T/I | 0.8415 | likely_pathogenic | 0.8155 | pathogenic | 0.11 | Stabilizing | 0.999 | D | 0.889 | deleterious | N | 0.507162943 | None | None | N |
T/K | 0.9753 | likely_pathogenic | 0.9554 | pathogenic | 0.135 | Stabilizing | 0.999 | D | 0.874 | deleterious | None | None | None | None | N |
T/L | 0.5082 | ambiguous | 0.4765 | ambiguous | 0.11 | Stabilizing | 0.998 | D | 0.785 | deleterious | None | None | None | None | N |
T/M | 0.4036 | ambiguous | 0.3501 | ambiguous | -0.024 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | N |
T/N | 0.7292 | likely_pathogenic | 0.6968 | pathogenic | -0.179 | Destabilizing | 0.999 | D | 0.818 | deleterious | N | 0.47464356 | None | None | N |
T/P | 0.9196 | likely_pathogenic | 0.8869 | pathogenic | -0.158 | Destabilizing | 0.999 | D | 0.863 | deleterious | N | 0.451808306 | None | None | N |
T/Q | 0.9606 | likely_pathogenic | 0.9414 | pathogenic | -0.074 | Destabilizing | 0.999 | D | 0.855 | deleterious | None | None | None | None | N |
T/R | 0.9784 | likely_pathogenic | 0.9594 | pathogenic | -0.012 | Destabilizing | 0.999 | D | 0.869 | deleterious | None | None | None | None | N |
T/S | 0.5719 | likely_pathogenic | 0.5423 | ambiguous | -0.603 | Destabilizing | 0.997 | D | 0.675 | prob.neutral | N | 0.499428894 | None | None | N |
T/V | 0.6955 | likely_pathogenic | 0.6705 | pathogenic | -0.158 | Destabilizing | 0.998 | D | 0.736 | deleterious | None | None | None | None | N |
T/W | 0.9928 | likely_pathogenic | 0.9885 | pathogenic | -0.564 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
T/Y | 0.9741 | likely_pathogenic | 0.9634 | pathogenic | -0.214 | Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.