Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18590 | 55993;55994;55995 | chr2:178601136;178601135;178601134 | chr2:179465863;179465862;179465861 |
N2AB | 16949 | 51070;51071;51072 | chr2:178601136;178601135;178601134 | chr2:179465863;179465862;179465861 |
N2A | 16022 | 48289;48290;48291 | chr2:178601136;178601135;178601134 | chr2:179465863;179465862;179465861 |
N2B | 9525 | 28798;28799;28800 | chr2:178601136;178601135;178601134 | chr2:179465863;179465862;179465861 |
Novex-1 | 9650 | 29173;29174;29175 | chr2:178601136;178601135;178601134 | chr2:179465863;179465862;179465861 |
Novex-2 | 9717 | 29374;29375;29376 | chr2:178601136;178601135;178601134 | chr2:179465863;179465862;179465861 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | None | None | 0.999 | N | 0.438 | 0.187 | 0.376921832658 | gnomAD-4.0.0 | 3.51893E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.17959E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.2185 | likely_benign | 0.1868 | benign | -1.299 | Destabilizing | 0.999 | D | 0.657 | neutral | None | None | None | None | N |
L/C | 0.4721 | ambiguous | 0.4349 | ambiguous | -0.714 | Destabilizing | 1.0 | D | 0.611 | neutral | None | None | None | None | N |
L/D | 0.4629 | ambiguous | 0.3721 | ambiguous | -0.777 | Destabilizing | 1.0 | D | 0.674 | neutral | None | None | None | None | N |
L/E | 0.2412 | likely_benign | 0.2014 | benign | -0.833 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | N |
L/F | 0.1533 | likely_benign | 0.1255 | benign | -1.052 | Destabilizing | 1.0 | D | 0.694 | prob.neutral | D | 0.522596542 | None | None | N |
L/G | 0.4358 | ambiguous | 0.3459 | ambiguous | -1.55 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
L/H | 0.2205 | likely_benign | 0.1796 | benign | -0.747 | Destabilizing | 1.0 | D | 0.65 | neutral | N | 0.456142264 | None | None | N |
L/I | 0.0993 | likely_benign | 0.0951 | benign | -0.721 | Destabilizing | 0.999 | D | 0.438 | neutral | N | 0.486118454 | None | None | N |
L/K | 0.1887 | likely_benign | 0.1641 | benign | -0.806 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | N |
L/M | 0.1155 | likely_benign | 0.1046 | benign | -0.488 | Destabilizing | 1.0 | D | 0.642 | neutral | None | None | None | None | N |
L/N | 0.2344 | likely_benign | 0.1924 | benign | -0.554 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
L/P | 0.284 | likely_benign | 0.2423 | benign | -0.881 | Destabilizing | 1.0 | D | 0.682 | prob.neutral | N | 0.492273635 | None | None | N |
L/Q | 0.1362 | likely_benign | 0.1181 | benign | -0.81 | Destabilizing | 1.0 | D | 0.639 | neutral | None | None | None | None | N |
L/R | 0.1757 | likely_benign | 0.1515 | benign | -0.144 | Destabilizing | 1.0 | D | 0.688 | prob.neutral | N | 0.434708199 | None | None | N |
L/S | 0.2483 | likely_benign | 0.1969 | benign | -1.086 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
L/T | 0.1825 | likely_benign | 0.1652 | benign | -1.034 | Destabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | N |
L/V | 0.1013 | likely_benign | 0.0934 | benign | -0.881 | Destabilizing | 0.999 | D | 0.489 | neutral | N | 0.457603701 | None | None | N |
L/W | 0.2888 | likely_benign | 0.2336 | benign | -1.067 | Destabilizing | 1.0 | D | 0.625 | neutral | None | None | None | None | N |
L/Y | 0.3028 | likely_benign | 0.256 | benign | -0.848 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.