Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18603 | 56032;56033;56034 | chr2:178601097;178601096;178601095 | chr2:179465824;179465823;179465822 |
N2AB | 16962 | 51109;51110;51111 | chr2:178601097;178601096;178601095 | chr2:179465824;179465823;179465822 |
N2A | 16035 | 48328;48329;48330 | chr2:178601097;178601096;178601095 | chr2:179465824;179465823;179465822 |
N2B | 9538 | 28837;28838;28839 | chr2:178601097;178601096;178601095 | chr2:179465824;179465823;179465822 |
Novex-1 | 9663 | 29212;29213;29214 | chr2:178601097;178601096;178601095 | chr2:179465824;179465823;179465822 |
Novex-2 | 9730 | 29413;29414;29415 | chr2:178601097;178601096;178601095 | chr2:179465824;179465823;179465822 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs531760043 | -0.599 | 0.996 | D | 0.889 | 0.651 | 0.873394877099 | gnomAD-2.1.1 | 2.09E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.49E-05 | None | 0 | 3.7E-05 | 0 |
P/L | rs531760043 | -0.599 | 0.996 | D | 0.889 | 0.651 | 0.873394877099 | gnomAD-4.0.0 | 9.64776E-06 | None | None | None | None | N | None | 0 | 2.2853E-05 | None | 0 | 0 | None | 0 | 0 | 9.94259E-06 | 2.36423E-05 | 0 |
P/S | None | None | 0.284 | D | 0.56 | 0.524 | 0.362361684037 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.9057 | likely_pathogenic | 0.8842 | pathogenic | -2.054 | Highly Destabilizing | 0.865 | D | 0.705 | prob.neutral | D | 0.560702208 | None | None | N |
P/C | 0.9886 | likely_pathogenic | 0.9872 | pathogenic | -1.558 | Destabilizing | 0.999 | D | 0.9 | deleterious | None | None | None | None | N |
P/D | 0.9992 | likely_pathogenic | 0.9994 | pathogenic | -3.131 | Highly Destabilizing | 0.983 | D | 0.825 | deleterious | None | None | None | None | N |
P/E | 0.9975 | likely_pathogenic | 0.998 | pathogenic | -2.977 | Highly Destabilizing | 0.983 | D | 0.821 | deleterious | None | None | None | None | N |
P/F | 0.9995 | likely_pathogenic | 0.9995 | pathogenic | -1.254 | Destabilizing | 0.998 | D | 0.909 | deleterious | None | None | None | None | N |
P/G | 0.989 | likely_pathogenic | 0.9894 | pathogenic | -2.503 | Highly Destabilizing | 0.895 | D | 0.801 | deleterious | None | None | None | None | N |
P/H | 0.9961 | likely_pathogenic | 0.9959 | pathogenic | -2.422 | Highly Destabilizing | 0.998 | D | 0.89 | deleterious | None | None | None | None | N |
P/I | 0.9964 | likely_pathogenic | 0.9955 | pathogenic | -0.813 | Destabilizing | 0.992 | D | 0.898 | deleterious | None | None | None | None | N |
P/K | 0.9981 | likely_pathogenic | 0.9984 | pathogenic | -1.892 | Destabilizing | 0.968 | D | 0.826 | deleterious | None | None | None | None | N |
P/L | 0.9832 | likely_pathogenic | 0.978 | pathogenic | -0.813 | Destabilizing | 0.996 | D | 0.889 | deleterious | D | 0.613696469 | None | None | N |
P/M | 0.9975 | likely_pathogenic | 0.9971 | pathogenic | -0.725 | Destabilizing | 0.999 | D | 0.893 | deleterious | None | None | None | None | N |
P/N | 0.9987 | likely_pathogenic | 0.999 | pathogenic | -2.082 | Highly Destabilizing | 0.968 | D | 0.891 | deleterious | None | None | None | None | N |
P/Q | 0.9939 | likely_pathogenic | 0.9942 | pathogenic | -2.01 | Highly Destabilizing | 0.991 | D | 0.837 | deleterious | D | 0.614705491 | None | None | N |
P/R | 0.9913 | likely_pathogenic | 0.9914 | pathogenic | -1.582 | Destabilizing | 0.991 | D | 0.883 | deleterious | D | 0.579446824 | None | None | N |
P/S | 0.9775 | likely_pathogenic | 0.9763 | pathogenic | -2.518 | Highly Destabilizing | 0.284 | N | 0.56 | neutral | D | 0.541957592 | None | None | N |
P/T | 0.9813 | likely_pathogenic | 0.9796 | pathogenic | -2.261 | Highly Destabilizing | 0.957 | D | 0.802 | deleterious | D | 0.592942734 | None | None | N |
P/V | 0.9856 | likely_pathogenic | 0.9813 | pathogenic | -1.203 | Destabilizing | 0.983 | D | 0.877 | deleterious | None | None | None | None | N |
P/W | 0.9997 | likely_pathogenic | 0.9997 | pathogenic | -1.89 | Destabilizing | 0.999 | D | 0.858 | deleterious | None | None | None | None | N |
P/Y | 0.9995 | likely_pathogenic | 0.9995 | pathogenic | -1.558 | Destabilizing | 0.999 | D | 0.907 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.