Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18605 | 56038;56039;56040 | chr2:178601091;178601090;178601089 | chr2:179465818;179465817;179465816 |
N2AB | 16964 | 51115;51116;51117 | chr2:178601091;178601090;178601089 | chr2:179465818;179465817;179465816 |
N2A | 16037 | 48334;48335;48336 | chr2:178601091;178601090;178601089 | chr2:179465818;179465817;179465816 |
N2B | 9540 | 28843;28844;28845 | chr2:178601091;178601090;178601089 | chr2:179465818;179465817;179465816 |
Novex-1 | 9665 | 29218;29219;29220 | chr2:178601091;178601090;178601089 | chr2:179465818;179465817;179465816 |
Novex-2 | 9732 | 29419;29420;29421 | chr2:178601091;178601090;178601089 | chr2:179465818;179465817;179465816 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/T | None | None | 0.999 | N | 0.499 | 0.37 | 0.369682402691 | gnomAD-4.0.0 | 1.61138E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.892E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.7327 | likely_pathogenic | 0.7089 | pathogenic | -0.473 | Destabilizing | 0.998 | D | 0.506 | neutral | None | None | None | None | I |
N/C | 0.655 | likely_pathogenic | 0.6466 | pathogenic | 0.359 | Stabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | I |
N/D | 0.672 | likely_pathogenic | 0.6575 | pathogenic | -0.238 | Destabilizing | 0.998 | D | 0.447 | neutral | N | 0.432473183 | None | None | I |
N/E | 0.8793 | likely_pathogenic | 0.8811 | pathogenic | -0.262 | Destabilizing | 0.997 | D | 0.467 | neutral | None | None | None | None | I |
N/F | 0.742 | likely_pathogenic | 0.7108 | pathogenic | -0.792 | Destabilizing | 1.0 | D | 0.675 | prob.neutral | None | None | None | None | I |
N/G | 0.7638 | likely_pathogenic | 0.7466 | pathogenic | -0.671 | Destabilizing | 0.998 | D | 0.406 | neutral | None | None | None | None | I |
N/H | 0.2592 | likely_benign | 0.229 | benign | -0.754 | Destabilizing | 0.64 | D | 0.245 | neutral | N | 0.496447304 | None | None | I |
N/I | 0.6844 | likely_pathogenic | 0.6842 | pathogenic | -0.032 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | N | 0.515033065 | None | None | I |
N/K | 0.8074 | likely_pathogenic | 0.7958 | pathogenic | 0.002 | Stabilizing | 0.998 | D | 0.502 | neutral | N | 0.479400339 | None | None | I |
N/L | 0.6688 | likely_pathogenic | 0.6619 | pathogenic | -0.032 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | I |
N/M | 0.6839 | likely_pathogenic | 0.6713 | pathogenic | 0.516 | Stabilizing | 1.0 | D | 0.606 | neutral | None | None | None | None | I |
N/P | 0.9815 | likely_pathogenic | 0.9859 | pathogenic | -0.152 | Destabilizing | 1.0 | D | 0.643 | neutral | None | None | None | None | I |
N/Q | 0.7565 | likely_pathogenic | 0.7482 | pathogenic | -0.549 | Destabilizing | 1.0 | D | 0.57 | neutral | None | None | None | None | I |
N/R | 0.7598 | likely_pathogenic | 0.7436 | pathogenic | 0.084 | Stabilizing | 1.0 | D | 0.547 | neutral | None | None | None | None | I |
N/S | 0.316 | likely_benign | 0.2871 | benign | -0.258 | Destabilizing | 0.998 | D | 0.405 | neutral | N | 0.467663192 | None | None | I |
N/T | 0.53 | ambiguous | 0.5227 | ambiguous | -0.135 | Destabilizing | 0.999 | D | 0.499 | neutral | N | 0.497351381 | None | None | I |
N/V | 0.687 | likely_pathogenic | 0.6808 | pathogenic | -0.152 | Destabilizing | 1.0 | D | 0.676 | prob.neutral | None | None | None | None | I |
N/W | 0.8685 | likely_pathogenic | 0.8538 | pathogenic | -0.722 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | I |
N/Y | 0.2335 | likely_benign | 0.2312 | benign | -0.473 | Destabilizing | 0.999 | D | 0.645 | neutral | N | 0.462777448 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.