Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18616 | 56071;56072;56073 | chr2:178601058;178601057;178601056 | chr2:179465785;179465784;179465783 |
N2AB | 16975 | 51148;51149;51150 | chr2:178601058;178601057;178601056 | chr2:179465785;179465784;179465783 |
N2A | 16048 | 48367;48368;48369 | chr2:178601058;178601057;178601056 | chr2:179465785;179465784;179465783 |
N2B | 9551 | 28876;28877;28878 | chr2:178601058;178601057;178601056 | chr2:179465785;179465784;179465783 |
Novex-1 | 9676 | 29251;29252;29253 | chr2:178601058;178601057;178601056 | chr2:179465785;179465784;179465783 |
Novex-2 | 9743 | 29452;29453;29454 | chr2:178601058;178601057;178601056 | chr2:179465785;179465784;179465783 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs2053304882 | None | 0.78 | D | 0.559 | 0.537 | 0.708570864396 | gnomAD-4.0.0 | 1.5935E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86228E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8544 | likely_pathogenic | 0.8623 | pathogenic | -2.553 | Highly Destabilizing | 0.78 | D | 0.559 | neutral | D | 0.523043837 | None | None | N |
V/C | 0.9717 | likely_pathogenic | 0.9709 | pathogenic | -1.959 | Destabilizing | 0.999 | D | 0.761 | deleterious | None | None | None | None | N |
V/D | 0.9978 | likely_pathogenic | 0.9988 | pathogenic | -3.521 | Highly Destabilizing | 0.995 | D | 0.873 | deleterious | D | 0.53516061 | None | None | N |
V/E | 0.9919 | likely_pathogenic | 0.995 | pathogenic | -3.196 | Highly Destabilizing | 0.996 | D | 0.846 | deleterious | None | None | None | None | N |
V/F | 0.9131 | likely_pathogenic | 0.9061 | pathogenic | -1.418 | Destabilizing | 0.968 | D | 0.741 | deleterious | D | 0.534907121 | None | None | N |
V/G | 0.9595 | likely_pathogenic | 0.9709 | pathogenic | -3.152 | Highly Destabilizing | 0.995 | D | 0.857 | deleterious | D | 0.53516061 | None | None | N |
V/H | 0.9981 | likely_pathogenic | 0.9985 | pathogenic | -3.022 | Highly Destabilizing | 0.999 | D | 0.877 | deleterious | None | None | None | None | N |
V/I | 0.0842 | likely_benign | 0.0739 | benign | -0.791 | Destabilizing | 0.011 | N | 0.173 | neutral | N | 0.420861828 | None | None | N |
V/K | 0.993 | likely_pathogenic | 0.9958 | pathogenic | -2.083 | Highly Destabilizing | 0.988 | D | 0.846 | deleterious | None | None | None | None | N |
V/L | 0.4919 | ambiguous | 0.467 | ambiguous | -0.791 | Destabilizing | 0.437 | N | 0.319 | neutral | N | 0.45976972 | None | None | N |
V/M | 0.7116 | likely_pathogenic | 0.6823 | pathogenic | -1.102 | Destabilizing | 0.976 | D | 0.623 | neutral | None | None | None | None | N |
V/N | 0.9933 | likely_pathogenic | 0.9953 | pathogenic | -2.811 | Highly Destabilizing | 0.996 | D | 0.893 | deleterious | None | None | None | None | N |
V/P | 0.9865 | likely_pathogenic | 0.9902 | pathogenic | -1.363 | Destabilizing | 0.996 | D | 0.855 | deleterious | None | None | None | None | N |
V/Q | 0.9919 | likely_pathogenic | 0.9946 | pathogenic | -2.429 | Highly Destabilizing | 0.996 | D | 0.88 | deleterious | None | None | None | None | N |
V/R | 0.9859 | likely_pathogenic | 0.992 | pathogenic | -2.183 | Highly Destabilizing | 0.996 | D | 0.889 | deleterious | None | None | None | None | N |
V/S | 0.9712 | likely_pathogenic | 0.977 | pathogenic | -3.278 | Highly Destabilizing | 0.988 | D | 0.808 | deleterious | None | None | None | None | N |
V/T | 0.8648 | likely_pathogenic | 0.8786 | pathogenic | -2.799 | Highly Destabilizing | 0.919 | D | 0.587 | neutral | None | None | None | None | N |
V/W | 0.9981 | likely_pathogenic | 0.9981 | pathogenic | -1.974 | Destabilizing | 0.999 | D | 0.852 | deleterious | None | None | None | None | N |
V/Y | 0.9938 | likely_pathogenic | 0.9946 | pathogenic | -1.726 | Destabilizing | 0.996 | D | 0.747 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.