Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1862 | 5809;5810;5811 | chr2:178776280;178776279;178776278 | chr2:179641007;179641006;179641005 |
N2AB | 1862 | 5809;5810;5811 | chr2:178776280;178776279;178776278 | chr2:179641007;179641006;179641005 |
N2A | 1862 | 5809;5810;5811 | chr2:178776280;178776279;178776278 | chr2:179641007;179641006;179641005 |
N2B | 1816 | 5671;5672;5673 | chr2:178776280;178776279;178776278 | chr2:179641007;179641006;179641005 |
Novex-1 | 1816 | 5671;5672;5673 | chr2:178776280;178776279;178776278 | chr2:179641007;179641006;179641005 |
Novex-2 | 1816 | 5671;5672;5673 | chr2:178776280;178776279;178776278 | chr2:179641007;179641006;179641005 |
Novex-3 | 1862 | 5809;5810;5811 | chr2:178776280;178776279;178776278 | chr2:179641007;179641006;179641005 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/G | rs2092215973 | None | 0.968 | D | 0.843 | 0.496 | 0.823553591755 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 1.01626E-03 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
C/S | None | None | 0.811 | D | 0.765 | 0.388 | 0.645225581225 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.8718 | likely_pathogenic | 0.8754 | pathogenic | -0.876 | Destabilizing | 0.702 | D | 0.725 | prob.delet. | None | None | None | None | N |
C/D | 0.9997 | likely_pathogenic | 0.9997 | pathogenic | -1.719 | Destabilizing | 0.976 | D | 0.85 | deleterious | None | None | None | None | N |
C/E | 0.9998 | likely_pathogenic | 0.9998 | pathogenic | -1.46 | Destabilizing | 0.976 | D | 0.855 | deleterious | None | None | None | None | N |
C/F | 0.9345 | likely_pathogenic | 0.9335 | pathogenic | -0.417 | Destabilizing | 0.984 | D | 0.819 | deleterious | D | 0.623757801 | None | None | N |
C/G | 0.8591 | likely_pathogenic | 0.8611 | pathogenic | -1.204 | Destabilizing | 0.968 | D | 0.843 | deleterious | D | 0.59252674 | None | None | N |
C/H | 0.9989 | likely_pathogenic | 0.9989 | pathogenic | -1.458 | Destabilizing | 0.999 | D | 0.862 | deleterious | None | None | None | None | N |
C/I | 0.8961 | likely_pathogenic | 0.8806 | pathogenic | 0.023 | Stabilizing | 0.976 | D | 0.803 | deleterious | None | None | None | None | N |
C/K | 0.9999 | likely_pathogenic | 0.9999 | pathogenic | -0.668 | Destabilizing | 0.976 | D | 0.852 | deleterious | None | None | None | None | N |
C/L | 0.8891 | likely_pathogenic | 0.8798 | pathogenic | 0.023 | Stabilizing | 0.851 | D | 0.755 | deleterious | None | None | None | None | N |
C/M | 0.9594 | likely_pathogenic | 0.9577 | pathogenic | -0.1 | Destabilizing | 0.999 | D | 0.769 | deleterious | None | None | None | None | N |
C/N | 0.9973 | likely_pathogenic | 0.9974 | pathogenic | -1.557 | Destabilizing | 0.976 | D | 0.855 | deleterious | None | None | None | None | N |
C/P | 0.9997 | likely_pathogenic | 0.9997 | pathogenic | -0.258 | Destabilizing | 0.988 | D | 0.854 | deleterious | None | None | None | None | N |
C/Q | 0.9994 | likely_pathogenic | 0.9993 | pathogenic | -0.995 | Destabilizing | 0.988 | D | 0.855 | deleterious | None | None | None | None | N |
C/R | 0.9991 | likely_pathogenic | 0.9991 | pathogenic | -1.299 | Destabilizing | 0.968 | D | 0.851 | deleterious | D | 0.738414964 | None | None | N |
C/S | 0.923 | likely_pathogenic | 0.9261 | pathogenic | -1.651 | Destabilizing | 0.811 | D | 0.765 | deleterious | D | 0.701363963 | None | None | N |
C/T | 0.9337 | likely_pathogenic | 0.9324 | pathogenic | -1.23 | Destabilizing | 0.132 | N | 0.614 | neutral | None | None | None | None | N |
C/V | 0.7418 | likely_pathogenic | 0.7194 | pathogenic | -0.258 | Destabilizing | 0.851 | D | 0.765 | deleterious | None | None | None | None | N |
C/W | 0.997 | likely_pathogenic | 0.9971 | pathogenic | -0.961 | Destabilizing | 0.999 | D | 0.837 | deleterious | D | 0.738414964 | None | None | N |
C/Y | 0.9902 | likely_pathogenic | 0.9902 | pathogenic | -0.65 | Destabilizing | 0.995 | D | 0.817 | deleterious | D | 0.73751645 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.