Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18630 | 56113;56114;56115 | chr2:178601016;178601015;178601014 | chr2:179465743;179465742;179465741 |
N2AB | 16989 | 51190;51191;51192 | chr2:178601016;178601015;178601014 | chr2:179465743;179465742;179465741 |
N2A | 16062 | 48409;48410;48411 | chr2:178601016;178601015;178601014 | chr2:179465743;179465742;179465741 |
N2B | 9565 | 28918;28919;28920 | chr2:178601016;178601015;178601014 | chr2:179465743;179465742;179465741 |
Novex-1 | 9690 | 29293;29294;29295 | chr2:178601016;178601015;178601014 | chr2:179465743;179465742;179465741 |
Novex-2 | 9757 | 29494;29495;29496 | chr2:178601016;178601015;178601014 | chr2:179465743;179465742;179465741 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | None | None | 0.669 | N | 0.285 | 0.199 | 0.366277470483 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4219 | ambiguous | 0.3596 | ambiguous | -0.733 | Destabilizing | 0.998 | D | 0.304 | neutral | None | None | None | None | N |
A/D | 0.1946 | likely_benign | 0.1705 | benign | -0.759 | Destabilizing | 0.801 | D | 0.331 | neutral | N | 0.401155773 | None | None | N |
A/E | 0.1806 | likely_benign | 0.1553 | benign | -0.885 | Destabilizing | 0.842 | D | 0.284 | neutral | None | None | None | None | N |
A/F | 0.2648 | likely_benign | 0.2019 | benign | -0.89 | Destabilizing | 0.974 | D | 0.386 | neutral | None | None | None | None | N |
A/G | 0.1133 | likely_benign | 0.1094 | benign | -0.504 | Destabilizing | 0.454 | N | 0.322 | neutral | N | 0.420722968 | None | None | N |
A/H | 0.3429 | ambiguous | 0.2775 | benign | -0.529 | Destabilizing | 0.998 | D | 0.401 | neutral | None | None | None | None | N |
A/I | 0.1949 | likely_benign | 0.1408 | benign | -0.356 | Destabilizing | 0.949 | D | 0.291 | neutral | None | None | None | None | N |
A/K | 0.3213 | likely_benign | 0.2679 | benign | -0.872 | Destabilizing | 0.842 | D | 0.276 | neutral | None | None | None | None | N |
A/L | 0.1578 | likely_benign | 0.1248 | benign | -0.356 | Destabilizing | 0.728 | D | 0.269 | neutral | None | None | None | None | N |
A/M | 0.198 | likely_benign | 0.1448 | benign | -0.499 | Destabilizing | 0.998 | D | 0.316 | neutral | None | None | None | None | N |
A/N | 0.1378 | likely_benign | 0.121 | benign | -0.491 | Destabilizing | 0.949 | D | 0.357 | neutral | None | None | None | None | N |
A/P | 0.182 | likely_benign | 0.1799 | benign | -0.34 | Destabilizing | 0.966 | D | 0.302 | neutral | N | 0.450389727 | None | None | N |
A/Q | 0.2438 | likely_benign | 0.2021 | benign | -0.753 | Destabilizing | 0.974 | D | 0.309 | neutral | None | None | None | None | N |
A/R | 0.3246 | likely_benign | 0.278 | benign | -0.388 | Destabilizing | 0.949 | D | 0.318 | neutral | None | None | None | None | N |
A/S | 0.077 | likely_benign | 0.072 | benign | -0.665 | Destabilizing | 0.022 | N | 0.177 | neutral | N | 0.406465592 | None | None | N |
A/T | 0.0762 | likely_benign | 0.0645 | benign | -0.715 | Destabilizing | 0.022 | N | 0.163 | neutral | N | 0.384263523 | None | None | N |
A/V | 0.1124 | likely_benign | 0.0886 | benign | -0.34 | Destabilizing | 0.669 | D | 0.285 | neutral | N | 0.436479068 | None | None | N |
A/W | 0.6068 | likely_pathogenic | 0.536 | ambiguous | -1.067 | Destabilizing | 0.998 | D | 0.542 | neutral | None | None | None | None | N |
A/Y | 0.3254 | likely_benign | 0.2773 | benign | -0.723 | Destabilizing | 0.991 | D | 0.393 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.