Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18647 | 56164;56165;56166 | chr2:178600965;178600964;178600963 | chr2:179465692;179465691;179465690 |
N2AB | 17006 | 51241;51242;51243 | chr2:178600965;178600964;178600963 | chr2:179465692;179465691;179465690 |
N2A | 16079 | 48460;48461;48462 | chr2:178600965;178600964;178600963 | chr2:179465692;179465691;179465690 |
N2B | 9582 | 28969;28970;28971 | chr2:178600965;178600964;178600963 | chr2:179465692;179465691;179465690 |
Novex-1 | 9707 | 29344;29345;29346 | chr2:178600965;178600964;178600963 | chr2:179465692;179465691;179465690 |
Novex-2 | 9774 | 29545;29546;29547 | chr2:178600965;178600964;178600963 | chr2:179465692;179465691;179465690 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs2053260795 | None | 1.0 | N | 0.775 | 0.474 | 0.382592752248 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 6.56E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/G | rs2053260795 | None | 1.0 | N | 0.775 | 0.474 | 0.382592752248 | gnomAD-4.0.0 | 2.47995E-06 | None | None | None | None | N | None | 0 | 1.66828E-05 | None | 0 | 0 | None | 0 | 0 | 2.54381E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2232 | likely_benign | 0.2092 | benign | -0.598 | Destabilizing | 0.999 | D | 0.709 | prob.delet. | N | 0.492084421 | None | None | N |
E/C | 0.8955 | likely_pathogenic | 0.8746 | pathogenic | -0.168 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
E/D | 0.231 | likely_benign | 0.2032 | benign | -0.603 | Destabilizing | 0.999 | D | 0.446 | neutral | N | 0.461473513 | None | None | N |
E/F | 0.8884 | likely_pathogenic | 0.8613 | pathogenic | -0.277 | Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
E/G | 0.218 | likely_benign | 0.2063 | benign | -0.86 | Destabilizing | 1.0 | D | 0.775 | deleterious | N | 0.497548956 | None | None | N |
E/H | 0.6166 | likely_pathogenic | 0.5957 | pathogenic | -0.217 | Destabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | N |
E/I | 0.5841 | likely_pathogenic | 0.5411 | ambiguous | 0.082 | Stabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
E/K | 0.1981 | likely_benign | 0.2077 | benign | 0.087 | Stabilizing | 0.999 | D | 0.557 | neutral | N | 0.461953515 | None | None | N |
E/L | 0.5844 | likely_pathogenic | 0.5505 | ambiguous | 0.082 | Stabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
E/M | 0.5927 | likely_pathogenic | 0.5724 | pathogenic | 0.301 | Stabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
E/N | 0.378 | ambiguous | 0.3391 | benign | -0.367 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
E/P | 0.6222 | likely_pathogenic | 0.63 | pathogenic | -0.123 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
E/Q | 0.1849 | likely_benign | 0.1867 | benign | -0.298 | Destabilizing | 1.0 | D | 0.601 | neutral | N | 0.482502146 | None | None | N |
E/R | 0.3365 | likely_benign | 0.3496 | ambiguous | 0.335 | Stabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | N |
E/S | 0.2645 | likely_benign | 0.2449 | benign | -0.549 | Destabilizing | 0.999 | D | 0.611 | neutral | None | None | None | None | N |
E/T | 0.2326 | likely_benign | 0.2102 | benign | -0.331 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
E/V | 0.352 | ambiguous | 0.3263 | benign | -0.123 | Destabilizing | 1.0 | D | 0.822 | deleterious | N | 0.479424555 | None | None | N |
E/W | 0.9501 | likely_pathogenic | 0.9357 | pathogenic | -0.046 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
E/Y | 0.8115 | likely_pathogenic | 0.7795 | pathogenic | -0.016 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.