Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18654 | 56185;56186;56187 | chr2:178600944;178600943;178600942 | chr2:179465671;179465670;179465669 |
N2AB | 17013 | 51262;51263;51264 | chr2:178600944;178600943;178600942 | chr2:179465671;179465670;179465669 |
N2A | 16086 | 48481;48482;48483 | chr2:178600944;178600943;178600942 | chr2:179465671;179465670;179465669 |
N2B | 9589 | 28990;28991;28992 | chr2:178600944;178600943;178600942 | chr2:179465671;179465670;179465669 |
Novex-1 | 9714 | 29365;29366;29367 | chr2:178600944;178600943;178600942 | chr2:179465671;179465670;179465669 |
Novex-2 | 9781 | 29566;29567;29568 | chr2:178600944;178600943;178600942 | chr2:179465671;179465670;179465669 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs2053252489 | None | 0.977 | N | 0.482 | 0.236 | 0.26169431596 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/D | rs2053252489 | None | 0.977 | N | 0.482 | 0.236 | 0.26169431596 | gnomAD-4.0.0 | 6.57869E-06 | None | None | None | None | N | None | 2.41418E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs879244493 | None | 0.955 | N | 0.533 | 0.307 | 0.198526703765 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs879244493 | None | 0.955 | N | 0.533 | 0.307 | 0.198526703765 | gnomAD-4.0.0 | 6.57981E-06 | None | None | None | None | N | None | 2.41429E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/V | None | None | 0.997 | N | 0.843 | 0.382 | 0.492134657179 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1754 | likely_benign | 0.1688 | benign | -0.947 | Destabilizing | 0.977 | D | 0.645 | neutral | N | 0.468788345 | None | None | N |
E/C | 0.7704 | likely_pathogenic | 0.7749 | pathogenic | -0.447 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
E/D | 0.2412 | likely_benign | 0.1983 | benign | -1.142 | Destabilizing | 0.977 | D | 0.482 | neutral | N | 0.513537129 | None | None | N |
E/F | 0.7234 | likely_pathogenic | 0.7083 | pathogenic | -0.245 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
E/G | 0.2814 | likely_benign | 0.2496 | benign | -1.389 | Destabilizing | 0.993 | D | 0.779 | deleterious | N | 0.4769551 | None | None | N |
E/H | 0.4567 | ambiguous | 0.4395 | ambiguous | -0.596 | Destabilizing | 0.999 | D | 0.73 | prob.delet. | None | None | None | None | N |
E/I | 0.2457 | likely_benign | 0.2433 | benign | 0.291 | Stabilizing | 0.998 | D | 0.858 | deleterious | None | None | None | None | N |
E/K | 0.1209 | likely_benign | 0.13 | benign | -0.723 | Destabilizing | 0.955 | D | 0.533 | neutral | N | 0.47694161 | None | None | N |
E/L | 0.3135 | likely_benign | 0.3192 | benign | 0.291 | Stabilizing | 0.995 | D | 0.845 | deleterious | None | None | None | None | N |
E/M | 0.3305 | likely_benign | 0.3366 | benign | 0.9 | Stabilizing | 0.999 | D | 0.831 | deleterious | None | None | None | None | N |
E/N | 0.2889 | likely_benign | 0.2524 | benign | -1.239 | Destabilizing | 0.995 | D | 0.723 | prob.delet. | None | None | None | None | N |
E/P | 0.6777 | likely_pathogenic | 0.6415 | pathogenic | -0.101 | Destabilizing | 0.998 | D | 0.851 | deleterious | None | None | None | None | N |
E/Q | 0.1036 | likely_benign | 0.1043 | benign | -1.008 | Destabilizing | 0.568 | D | 0.22 | neutral | N | 0.509688747 | None | None | N |
E/R | 0.2122 | likely_benign | 0.222 | benign | -0.545 | Destabilizing | 0.99 | D | 0.722 | prob.delet. | None | None | None | None | N |
E/S | 0.2195 | likely_benign | 0.1995 | benign | -1.729 | Destabilizing | 0.983 | D | 0.576 | neutral | None | None | None | None | N |
E/T | 0.1746 | likely_benign | 0.1632 | benign | -1.335 | Destabilizing | 0.995 | D | 0.807 | deleterious | None | None | None | None | N |
E/V | 0.1678 | likely_benign | 0.1653 | benign | -0.101 | Destabilizing | 0.997 | D | 0.843 | deleterious | N | 0.516193432 | None | None | N |
E/W | 0.8829 | likely_pathogenic | 0.8734 | pathogenic | -0.009 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
E/Y | 0.6177 | likely_pathogenic | 0.5951 | pathogenic | 0.035 | Stabilizing | 0.999 | D | 0.855 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.