Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18655 | 56188;56189;56190 | chr2:178600941;178600940;178600939 | chr2:179465668;179465667;179465666 |
N2AB | 17014 | 51265;51266;51267 | chr2:178600941;178600940;178600939 | chr2:179465668;179465667;179465666 |
N2A | 16087 | 48484;48485;48486 | chr2:178600941;178600940;178600939 | chr2:179465668;179465667;179465666 |
N2B | 9590 | 28993;28994;28995 | chr2:178600941;178600940;178600939 | chr2:179465668;179465667;179465666 |
Novex-1 | 9715 | 29368;29369;29370 | chr2:178600941;178600940;178600939 | chr2:179465668;179465667;179465666 |
Novex-2 | 9782 | 29569;29570;29571 | chr2:178600941;178600940;178600939 | chr2:179465668;179465667;179465666 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs1391393842 | None | 1.0 | D | 0.848 | 0.842 | 0.803198302387 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9769 | likely_pathogenic | 0.9722 | pathogenic | -2.807 | Highly Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
Y/C | 0.8249 | likely_pathogenic | 0.774 | pathogenic | -1.671 | Destabilizing | 1.0 | D | 0.848 | deleterious | D | 0.640432843 | None | None | N |
Y/D | 0.9858 | likely_pathogenic | 0.9819 | pathogenic | -2.916 | Highly Destabilizing | 1.0 | D | 0.843 | deleterious | D | 0.67270373 | None | None | N |
Y/E | 0.9931 | likely_pathogenic | 0.9913 | pathogenic | -2.718 | Highly Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
Y/F | 0.2224 | likely_benign | 0.2249 | benign | -0.928 | Destabilizing | 0.999 | D | 0.728 | prob.delet. | D | 0.607970871 | None | None | N |
Y/G | 0.9668 | likely_pathogenic | 0.9608 | pathogenic | -3.23 | Highly Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
Y/H | 0.9025 | likely_pathogenic | 0.8713 | pathogenic | -1.773 | Destabilizing | 1.0 | D | 0.787 | deleterious | D | 0.647165618 | None | None | N |
Y/I | 0.9218 | likely_pathogenic | 0.9166 | pathogenic | -1.423 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
Y/K | 0.9875 | likely_pathogenic | 0.9845 | pathogenic | -1.987 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
Y/L | 0.8965 | likely_pathogenic | 0.8911 | pathogenic | -1.423 | Destabilizing | 0.999 | D | 0.765 | deleterious | None | None | None | None | N |
Y/M | 0.9252 | likely_pathogenic | 0.9183 | pathogenic | -1.183 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
Y/N | 0.8947 | likely_pathogenic | 0.8728 | pathogenic | -2.731 | Highly Destabilizing | 1.0 | D | 0.827 | deleterious | D | 0.672501926 | None | None | N |
Y/P | 0.9991 | likely_pathogenic | 0.9989 | pathogenic | -1.896 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
Y/Q | 0.9857 | likely_pathogenic | 0.9814 | pathogenic | -2.484 | Highly Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
Y/R | 0.9731 | likely_pathogenic | 0.9658 | pathogenic | -1.772 | Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
Y/S | 0.9558 | likely_pathogenic | 0.9449 | pathogenic | -3.144 | Highly Destabilizing | 1.0 | D | 0.818 | deleterious | D | 0.67270373 | None | None | N |
Y/T | 0.9736 | likely_pathogenic | 0.9653 | pathogenic | -2.824 | Highly Destabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | N |
Y/V | 0.8615 | likely_pathogenic | 0.8544 | pathogenic | -1.896 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
Y/W | 0.7261 | likely_pathogenic | 0.7243 | pathogenic | -0.285 | Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.