Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18690 | 56293;56294;56295 | chr2:178599833;178599832;178599831 | chr2:179464560;179464559;179464558 |
N2AB | 17049 | 51370;51371;51372 | chr2:178599833;178599832;178599831 | chr2:179464560;179464559;179464558 |
N2A | 16122 | 48589;48590;48591 | chr2:178599833;178599832;178599831 | chr2:179464560;179464559;179464558 |
N2B | 9625 | 29098;29099;29100 | chr2:178599833;178599832;178599831 | chr2:179464560;179464559;179464558 |
Novex-1 | 9750 | 29473;29474;29475 | chr2:178599833;178599832;178599831 | chr2:179464560;179464559;179464558 |
Novex-2 | 9817 | 29674;29675;29676 | chr2:178599833;178599832;178599831 | chr2:179464560;179464559;179464558 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | None | None | 0.999 | N | 0.517 | 0.355 | 0.490352026379 | gnomAD-4.0.0 | 1.65436E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.94301E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8386 | likely_pathogenic | 0.8072 | pathogenic | -2.382 | Highly Destabilizing | 0.999 | D | 0.691 | prob.neutral | None | None | None | None | I |
L/C | 0.8255 | likely_pathogenic | 0.7823 | pathogenic | -1.447 | Destabilizing | 1.0 | D | 0.664 | neutral | None | None | None | None | I |
L/D | 0.995 | likely_pathogenic | 0.9934 | pathogenic | -2.434 | Highly Destabilizing | 1.0 | D | 0.72 | prob.delet. | None | None | None | None | I |
L/E | 0.9758 | likely_pathogenic | 0.9704 | pathogenic | -2.343 | Highly Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | I |
L/F | 0.6126 | likely_pathogenic | 0.4931 | ambiguous | -1.545 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | I |
L/G | 0.9558 | likely_pathogenic | 0.9409 | pathogenic | -2.81 | Highly Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | I |
L/H | 0.9646 | likely_pathogenic | 0.9517 | pathogenic | -2.184 | Highly Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | I |
L/I | 0.1886 | likely_benign | 0.1721 | benign | -1.201 | Destabilizing | 0.999 | D | 0.517 | neutral | N | 0.500944339 | None | None | I |
L/K | 0.9645 | likely_pathogenic | 0.9592 | pathogenic | -1.951 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | I |
L/M | 0.185 | likely_benign | 0.1699 | benign | -0.881 | Destabilizing | 1.0 | D | 0.662 | neutral | None | None | None | None | I |
L/N | 0.974 | likely_pathogenic | 0.9661 | pathogenic | -1.869 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | I |
L/P | 0.97 | likely_pathogenic | 0.9556 | pathogenic | -1.571 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | N | 0.51516443 | None | None | I |
L/Q | 0.923 | likely_pathogenic | 0.9018 | pathogenic | -1.949 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | N | 0.520647607 | None | None | I |
L/R | 0.951 | likely_pathogenic | 0.937 | pathogenic | -1.384 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | N | 0.494971947 | None | None | I |
L/S | 0.9457 | likely_pathogenic | 0.9254 | pathogenic | -2.466 | Highly Destabilizing | 1.0 | D | 0.72 | prob.delet. | None | None | None | None | I |
L/T | 0.7346 | likely_pathogenic | 0.7042 | pathogenic | -2.26 | Highly Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | I |
L/V | 0.1958 | likely_benign | 0.1743 | benign | -1.571 | Destabilizing | 0.999 | D | 0.565 | neutral | N | 0.497018599 | None | None | I |
L/W | 0.9276 | likely_pathogenic | 0.8893 | pathogenic | -1.804 | Destabilizing | 1.0 | D | 0.706 | prob.neutral | None | None | None | None | I |
L/Y | 0.9505 | likely_pathogenic | 0.9319 | pathogenic | -1.599 | Destabilizing | 1.0 | D | 0.716 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.