Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18697 | 56314;56315;56316 | chr2:178599812;178599811;178599810 | chr2:179464539;179464538;179464537 |
N2AB | 17056 | 51391;51392;51393 | chr2:178599812;178599811;178599810 | chr2:179464539;179464538;179464537 |
N2A | 16129 | 48610;48611;48612 | chr2:178599812;178599811;178599810 | chr2:179464539;179464538;179464537 |
N2B | 9632 | 29119;29120;29121 | chr2:178599812;178599811;178599810 | chr2:179464539;179464538;179464537 |
Novex-1 | 9757 | 29494;29495;29496 | chr2:178599812;178599811;178599810 | chr2:179464539;179464538;179464537 |
Novex-2 | 9824 | 29695;29696;29697 | chr2:178599812;178599811;178599810 | chr2:179464539;179464538;179464537 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs767433299 | -0.15 | 0.996 | N | 0.541 | 0.219 | 0.288727942641 | gnomAD-2.1.1 | 4.17E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.11E-06 | 0 |
E/D | rs767433299 | -0.15 | 0.996 | N | 0.541 | 0.219 | 0.288727942641 | gnomAD-4.0.0 | 1.61808E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.89149E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1854 | likely_benign | 0.1755 | benign | -0.436 | Destabilizing | 0.619 | D | 0.447 | neutral | N | 0.469277424 | None | None | N |
E/C | 0.8881 | likely_pathogenic | 0.8972 | pathogenic | -0.098 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
E/D | 0.283 | likely_benign | 0.3248 | benign | -0.38 | Destabilizing | 0.996 | D | 0.541 | neutral | N | 0.513606992 | None | None | N |
E/F | 0.8561 | likely_pathogenic | 0.8663 | pathogenic | -0.289 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
E/G | 0.313 | likely_benign | 0.3239 | benign | -0.631 | Destabilizing | 0.984 | D | 0.65 | neutral | D | 0.52769101 | None | None | N |
E/H | 0.6508 | likely_pathogenic | 0.6803 | pathogenic | -0.028 | Destabilizing | 1.0 | D | 0.653 | neutral | None | None | None | None | N |
E/I | 0.4355 | ambiguous | 0.4309 | ambiguous | 0.045 | Stabilizing | 0.999 | D | 0.714 | prob.delet. | None | None | None | None | N |
E/K | 0.175 | likely_benign | 0.2064 | benign | 0.308 | Stabilizing | 0.992 | D | 0.642 | neutral | N | 0.474779245 | None | None | N |
E/L | 0.442 | ambiguous | 0.4408 | ambiguous | 0.045 | Stabilizing | 0.998 | D | 0.661 | neutral | None | None | None | None | N |
E/M | 0.525 | ambiguous | 0.511 | ambiguous | 0.135 | Stabilizing | 1.0 | D | 0.69 | prob.neutral | None | None | None | None | N |
E/N | 0.4582 | ambiguous | 0.4979 | ambiguous | -0.067 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | N |
E/P | 0.431 | ambiguous | 0.4839 | ambiguous | -0.095 | Destabilizing | 0.999 | D | 0.67 | neutral | None | None | None | None | N |
E/Q | 0.1701 | likely_benign | 0.1783 | benign | -0.031 | Destabilizing | 1.0 | D | 0.603 | neutral | N | 0.490306058 | None | None | N |
E/R | 0.296 | likely_benign | 0.339 | benign | 0.523 | Stabilizing | 0.999 | D | 0.683 | prob.neutral | None | None | None | None | N |
E/S | 0.3438 | ambiguous | 0.3514 | ambiguous | -0.214 | Destabilizing | 0.988 | D | 0.642 | neutral | None | None | None | None | N |
E/T | 0.3005 | likely_benign | 0.2936 | benign | -0.052 | Destabilizing | 0.998 | D | 0.63 | neutral | None | None | None | None | N |
E/V | 0.2556 | likely_benign | 0.244 | benign | -0.095 | Destabilizing | 0.998 | D | 0.612 | neutral | N | 0.475070033 | None | None | N |
E/W | 0.9439 | likely_pathogenic | 0.9537 | pathogenic | -0.121 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
E/Y | 0.7785 | likely_pathogenic | 0.8118 | pathogenic | -0.044 | Destabilizing | 1.0 | D | 0.7 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.