Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18714 | 56365;56366;56367 | chr2:178599761;178599760;178599759 | chr2:179464488;179464487;179464486 |
N2AB | 17073 | 51442;51443;51444 | chr2:178599761;178599760;178599759 | chr2:179464488;179464487;179464486 |
N2A | 16146 | 48661;48662;48663 | chr2:178599761;178599760;178599759 | chr2:179464488;179464487;179464486 |
N2B | 9649 | 29170;29171;29172 | chr2:178599761;178599760;178599759 | chr2:179464488;179464487;179464486 |
Novex-1 | 9774 | 29545;29546;29547 | chr2:178599761;178599760;178599759 | chr2:179464488;179464487;179464486 |
Novex-2 | 9841 | 29746;29747;29748 | chr2:178599761;178599760;178599759 | chr2:179464488;179464487;179464486 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs2052778665 | None | 1.0 | D | 0.761 | 0.82 | 0.889922392587 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | I | None | 2.42E-05 | 0 | 0 | 0 | 0 | None | 9.43E-05 | 0 | 0 | 0 | 0 |
P/L | rs2052778665 | None | 1.0 | D | 0.761 | 0.82 | 0.889922392587 | gnomAD-4.0.0 | 3.10147E-06 | None | None | None | None | I | None | 4.01059E-05 | 0 | None | 0 | 0 | None | 3.1294E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.8442 | likely_pathogenic | 0.8143 | pathogenic | -1.354 | Destabilizing | 1.0 | D | 0.757 | deleterious | N | 0.511520764 | None | None | I |
P/C | 0.9838 | likely_pathogenic | 0.9817 | pathogenic | -1.001 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | I |
P/D | 0.9993 | likely_pathogenic | 0.9992 | pathogenic | -0.744 | Destabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | I |
P/E | 0.9981 | likely_pathogenic | 0.9978 | pathogenic | -0.71 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | I |
P/F | 0.9993 | likely_pathogenic | 0.9991 | pathogenic | -0.989 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | I |
P/G | 0.9898 | likely_pathogenic | 0.9886 | pathogenic | -1.702 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | I |
P/H | 0.9967 | likely_pathogenic | 0.9963 | pathogenic | -1.246 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | I |
P/I | 0.9932 | likely_pathogenic | 0.9897 | pathogenic | -0.494 | Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | I |
P/K | 0.999 | likely_pathogenic | 0.9987 | pathogenic | -1.002 | Destabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | I |
P/L | 0.9667 | likely_pathogenic | 0.9494 | pathogenic | -0.494 | Destabilizing | 1.0 | D | 0.761 | deleterious | D | 0.562120091 | None | None | I |
P/M | 0.9961 | likely_pathogenic | 0.9945 | pathogenic | -0.481 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | I |
P/N | 0.9989 | likely_pathogenic | 0.9987 | pathogenic | -0.861 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | I |
P/Q | 0.9951 | likely_pathogenic | 0.9941 | pathogenic | -0.938 | Destabilizing | 1.0 | D | 0.779 | deleterious | D | 0.566682902 | None | None | I |
P/R | 0.995 | likely_pathogenic | 0.994 | pathogenic | -0.634 | Destabilizing | 1.0 | D | 0.765 | deleterious | D | 0.566682902 | None | None | I |
P/S | 0.9784 | likely_pathogenic | 0.9747 | pathogenic | -1.48 | Destabilizing | 1.0 | D | 0.784 | deleterious | D | 0.554819618 | None | None | I |
P/T | 0.982 | likely_pathogenic | 0.9751 | pathogenic | -1.317 | Destabilizing | 1.0 | D | 0.783 | deleterious | D | 0.566175923 | None | None | I |
P/V | 0.9763 | likely_pathogenic | 0.9683 | pathogenic | -0.745 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | I |
P/W | 0.9997 | likely_pathogenic | 0.9997 | pathogenic | -1.19 | Destabilizing | 1.0 | D | 0.688 | prob.neutral | None | None | None | None | I |
P/Y | 0.9995 | likely_pathogenic | 0.9994 | pathogenic | -0.858 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.