Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18716 | 56371;56372;56373 | chr2:178599755;178599754;178599753 | chr2:179464482;179464481;179464480 |
N2AB | 17075 | 51448;51449;51450 | chr2:178599755;178599754;178599753 | chr2:179464482;179464481;179464480 |
N2A | 16148 | 48667;48668;48669 | chr2:178599755;178599754;178599753 | chr2:179464482;179464481;179464480 |
N2B | 9651 | 29176;29177;29178 | chr2:178599755;178599754;178599753 | chr2:179464482;179464481;179464480 |
Novex-1 | 9776 | 29551;29552;29553 | chr2:178599755;178599754;178599753 | chr2:179464482;179464481;179464480 |
Novex-2 | 9843 | 29752;29753;29754 | chr2:178599755;178599754;178599753 | chr2:179464482;179464481;179464480 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | rs1216121898 | None | 0.999 | N | 0.625 | 0.243 | 0.403896168776 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
L/V | rs1216121898 | None | 0.999 | N | 0.625 | 0.243 | 0.403896168776 | gnomAD-4.0.0 | 2.5658E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.79209E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.7125 | likely_pathogenic | 0.6767 | pathogenic | -2.17 | Highly Destabilizing | 0.999 | D | 0.763 | deleterious | None | None | None | None | I |
L/C | 0.7451 | likely_pathogenic | 0.7213 | pathogenic | -1.39 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | I |
L/D | 0.9952 | likely_pathogenic | 0.9937 | pathogenic | -1.805 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | I |
L/E | 0.9676 | likely_pathogenic | 0.9601 | pathogenic | -1.708 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | I |
L/F | 0.5737 | likely_pathogenic | 0.52 | ambiguous | -1.364 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | I |
L/G | 0.9661 | likely_pathogenic | 0.9531 | pathogenic | -2.598 | Highly Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | I |
L/H | 0.9334 | likely_pathogenic | 0.914 | pathogenic | -1.752 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | I |
L/I | 0.0983 | likely_benign | 0.0962 | benign | -1.003 | Destabilizing | 0.999 | D | 0.615 | neutral | N | 0.416861518 | None | None | I |
L/K | 0.9463 | likely_pathogenic | 0.9317 | pathogenic | -1.679 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | I |
L/M | 0.2178 | likely_benign | 0.21 | benign | -0.806 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | I |
L/N | 0.9654 | likely_pathogenic | 0.9553 | pathogenic | -1.627 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | I |
L/P | 0.942 | likely_pathogenic | 0.9256 | pathogenic | -1.366 | Destabilizing | 1.0 | D | 0.858 | deleterious | N | 0.520499396 | None | None | I |
L/Q | 0.8978 | likely_pathogenic | 0.8767 | pathogenic | -1.681 | Destabilizing | 1.0 | D | 0.879 | deleterious | N | 0.508978506 | None | None | I |
L/R | 0.9251 | likely_pathogenic | 0.8973 | pathogenic | -1.147 | Destabilizing | 1.0 | D | 0.875 | deleterious | N | 0.508978506 | None | None | I |
L/S | 0.9251 | likely_pathogenic | 0.9048 | pathogenic | -2.298 | Highly Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | I |
L/T | 0.7135 | likely_pathogenic | 0.6878 | pathogenic | -2.065 | Highly Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | I |
L/V | 0.0935 | likely_benign | 0.0938 | benign | -1.366 | Destabilizing | 0.999 | D | 0.625 | neutral | N | 0.43247597 | None | None | I |
L/W | 0.9153 | likely_pathogenic | 0.8804 | pathogenic | -1.513 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | I |
L/Y | 0.9052 | likely_pathogenic | 0.8824 | pathogenic | -1.304 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.