Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1872 | 5839;5840;5841 | chr2:178776250;178776249;178776248 | chr2:179640977;179640976;179640975 |
N2AB | 1872 | 5839;5840;5841 | chr2:178776250;178776249;178776248 | chr2:179640977;179640976;179640975 |
N2A | 1872 | 5839;5840;5841 | chr2:178776250;178776249;178776248 | chr2:179640977;179640976;179640975 |
N2B | 1826 | 5701;5702;5703 | chr2:178776250;178776249;178776248 | chr2:179640977;179640976;179640975 |
Novex-1 | 1826 | 5701;5702;5703 | chr2:178776250;178776249;178776248 | chr2:179640977;179640976;179640975 |
Novex-2 | 1826 | 5701;5702;5703 | chr2:178776250;178776249;178776248 | chr2:179640977;179640976;179640975 |
Novex-3 | 1872 | 5839;5840;5841 | chr2:178776250;178776249;178776248 | chr2:179640977;179640976;179640975 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.039 | D | 0.309 | 0.286 | 0.332902724076 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.9203 | likely_pathogenic | 0.9206 | pathogenic | -1.653 | Destabilizing | 0.928 | D | 0.64 | neutral | D | 0.68596939 | None | None | I |
V/C | 0.9776 | likely_pathogenic | 0.9783 | pathogenic | -0.808 | Destabilizing | 0.999 | D | 0.748 | deleterious | None | None | None | None | I |
V/D | 0.9982 | likely_pathogenic | 0.9981 | pathogenic | -1.818 | Destabilizing | 0.996 | D | 0.833 | deleterious | D | 0.780824125 | None | None | I |
V/E | 0.9912 | likely_pathogenic | 0.99 | pathogenic | -1.796 | Destabilizing | 0.992 | D | 0.833 | deleterious | None | None | None | None | I |
V/F | 0.9365 | likely_pathogenic | 0.9168 | pathogenic | -1.288 | Destabilizing | 0.957 | D | 0.772 | deleterious | D | 0.631720315 | None | None | I |
V/G | 0.9593 | likely_pathogenic | 0.9581 | pathogenic | -1.994 | Destabilizing | 0.989 | D | 0.839 | deleterious | D | 0.744625307 | None | None | I |
V/H | 0.9982 | likely_pathogenic | 0.9979 | pathogenic | -1.685 | Destabilizing | 0.999 | D | 0.833 | deleterious | None | None | None | None | I |
V/I | 0.12 | likely_benign | 0.1074 | benign | -0.79 | Destabilizing | 0.726 | D | 0.594 | neutral | N | 0.516348527 | None | None | I |
V/K | 0.9939 | likely_pathogenic | 0.9931 | pathogenic | -1.411 | Destabilizing | 0.992 | D | 0.832 | deleterious | None | None | None | None | I |
V/L | 0.6532 | likely_pathogenic | 0.6281 | pathogenic | -0.79 | Destabilizing | 0.039 | N | 0.309 | neutral | D | 0.549750545 | None | None | I |
V/M | 0.7351 | likely_pathogenic | 0.6981 | pathogenic | -0.451 | Destabilizing | 0.983 | D | 0.729 | prob.delet. | None | None | None | None | I |
V/N | 0.9925 | likely_pathogenic | 0.9917 | pathogenic | -1.123 | Destabilizing | 0.997 | D | 0.847 | deleterious | None | None | None | None | I |
V/P | 0.9921 | likely_pathogenic | 0.993 | pathogenic | -1.046 | Destabilizing | 0.997 | D | 0.834 | deleterious | None | None | None | None | I |
V/Q | 0.9926 | likely_pathogenic | 0.9916 | pathogenic | -1.27 | Destabilizing | 0.997 | D | 0.843 | deleterious | None | None | None | None | I |
V/R | 0.9923 | likely_pathogenic | 0.9914 | pathogenic | -0.91 | Destabilizing | 0.992 | D | 0.843 | deleterious | None | None | None | None | I |
V/S | 0.983 | likely_pathogenic | 0.9823 | pathogenic | -1.556 | Destabilizing | 0.992 | D | 0.833 | deleterious | None | None | None | None | I |
V/T | 0.9052 | likely_pathogenic | 0.9072 | pathogenic | -1.43 | Destabilizing | 0.944 | D | 0.685 | prob.neutral | None | None | None | None | I |
V/W | 0.9983 | likely_pathogenic | 0.9977 | pathogenic | -1.563 | Destabilizing | 0.999 | D | 0.828 | deleterious | None | None | None | None | I |
V/Y | 0.9939 | likely_pathogenic | 0.9922 | pathogenic | -1.286 | Destabilizing | 0.992 | D | 0.768 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.