Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18722 | 56389;56390;56391 | chr2:178599737;178599736;178599735 | chr2:179464464;179464463;179464462 |
N2AB | 17081 | 51466;51467;51468 | chr2:178599737;178599736;178599735 | chr2:179464464;179464463;179464462 |
N2A | 16154 | 48685;48686;48687 | chr2:178599737;178599736;178599735 | chr2:179464464;179464463;179464462 |
N2B | 9657 | 29194;29195;29196 | chr2:178599737;178599736;178599735 | chr2:179464464;179464463;179464462 |
Novex-1 | 9782 | 29569;29570;29571 | chr2:178599737;178599736;178599735 | chr2:179464464;179464463;179464462 |
Novex-2 | 9849 | 29770;29771;29772 | chr2:178599737;178599736;178599735 | chr2:179464464;179464463;179464462 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs1480758213 | -0.477 | 0.007 | N | 0.309 | 0.146 | 0.413241256734 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0744 | likely_benign | 0.0744 | benign | -1.393 | Destabilizing | 0.012 | N | 0.181 | neutral | N | 0.449011222 | None | None | N |
P/C | 0.4299 | ambiguous | 0.3803 | ambiguous | -0.842 | Destabilizing | 0.996 | D | 0.439 | neutral | None | None | None | None | N |
P/D | 0.3129 | likely_benign | 0.2597 | benign | -1.24 | Destabilizing | 0.742 | D | 0.339 | neutral | None | None | None | None | N |
P/E | 0.2155 | likely_benign | 0.1923 | benign | -1.268 | Destabilizing | 0.742 | D | 0.335 | neutral | None | None | None | None | N |
P/F | 0.3543 | ambiguous | 0.3122 | benign | -1.124 | Destabilizing | 0.91 | D | 0.436 | neutral | None | None | None | None | N |
P/G | 0.2791 | likely_benign | 0.2479 | benign | -1.687 | Destabilizing | 0.59 | D | 0.351 | neutral | None | None | None | None | N |
P/H | 0.1749 | likely_benign | 0.1432 | benign | -1.273 | Destabilizing | 0.994 | D | 0.399 | neutral | N | 0.475544462 | None | None | N |
P/I | 0.2279 | likely_benign | 0.2068 | benign | -0.694 | Destabilizing | 0.59 | D | 0.37 | neutral | None | None | None | None | N |
P/K | 0.2392 | likely_benign | 0.2016 | benign | -1.196 | Destabilizing | 0.742 | D | 0.323 | neutral | None | None | None | None | N |
P/L | 0.1056 | likely_benign | 0.0954 | benign | -0.694 | Destabilizing | 0.007 | N | 0.309 | neutral | N | 0.463249955 | None | None | N |
P/M | 0.2369 | likely_benign | 0.214 | benign | -0.462 | Destabilizing | 0.91 | D | 0.398 | neutral | None | None | None | None | N |
P/N | 0.2546 | likely_benign | 0.2045 | benign | -0.878 | Destabilizing | 0.91 | D | 0.389 | neutral | None | None | None | None | N |
P/Q | 0.1379 | likely_benign | 0.1232 | benign | -1.085 | Destabilizing | 0.953 | D | 0.355 | neutral | None | None | None | None | N |
P/R | 0.2012 | likely_benign | 0.1718 | benign | -0.647 | Destabilizing | 0.884 | D | 0.391 | neutral | N | 0.459612217 | None | None | N |
P/S | 0.103 | likely_benign | 0.0878 | benign | -1.359 | Destabilizing | 0.012 | N | 0.177 | neutral | N | 0.418939031 | None | None | N |
P/T | 0.0999 | likely_benign | 0.0935 | benign | -1.284 | Destabilizing | 0.521 | D | 0.351 | neutral | N | 0.442797325 | None | None | N |
P/V | 0.162 | likely_benign | 0.1525 | benign | -0.891 | Destabilizing | 0.59 | D | 0.342 | neutral | None | None | None | None | N |
P/W | 0.602 | likely_pathogenic | 0.525 | ambiguous | -1.292 | Destabilizing | 0.996 | D | 0.522 | neutral | None | None | None | None | N |
P/Y | 0.3514 | ambiguous | 0.3167 | benign | -1.027 | Destabilizing | 0.953 | D | 0.437 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.