Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18728 | 56407;56408;56409 | chr2:178599719;178599718;178599717 | chr2:179464446;179464445;179464444 |
N2AB | 17087 | 51484;51485;51486 | chr2:178599719;178599718;178599717 | chr2:179464446;179464445;179464444 |
N2A | 16160 | 48703;48704;48705 | chr2:178599719;178599718;178599717 | chr2:179464446;179464445;179464444 |
N2B | 9663 | 29212;29213;29214 | chr2:178599719;178599718;178599717 | chr2:179464446;179464445;179464444 |
Novex-1 | 9788 | 29587;29588;29589 | chr2:178599719;178599718;178599717 | chr2:179464446;179464445;179464444 |
Novex-2 | 9855 | 29788;29789;29790 | chr2:178599719;178599718;178599717 | chr2:179464446;179464445;179464444 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | None | None | None | N | 0.116 | 0.089 | 0.181679512989 | gnomAD-4.0.0 | 4.10717E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.73732E-04 | 4.49892E-06 | 0 | 0 |
N/K | rs2052768843 | None | None | N | 0.116 | 0.079 | 0.0762999501168 | gnomAD-4.0.0 | 6.84544E-07 | None | None | None | None | N | None | 2.99204E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1098 | likely_benign | 0.0916 | benign | -0.409 | Destabilizing | None | N | 0.159 | neutral | None | None | None | None | N |
N/C | 0.1347 | likely_benign | 0.1383 | benign | 0.41 | Stabilizing | 0.55 | D | 0.213 | neutral | None | None | None | None | N |
N/D | 0.0738 | likely_benign | 0.0646 | benign | -0.161 | Destabilizing | None | N | 0.116 | neutral | N | 0.435062411 | None | None | N |
N/E | 0.1512 | likely_benign | 0.1072 | benign | -0.16 | Destabilizing | None | N | 0.117 | neutral | None | None | None | None | N |
N/F | 0.2772 | likely_benign | 0.2518 | benign | -0.504 | Destabilizing | 0.245 | N | 0.275 | neutral | None | None | None | None | N |
N/G | 0.1602 | likely_benign | 0.1443 | benign | -0.65 | Destabilizing | 0.004 | N | 0.201 | neutral | None | None | None | None | N |
N/H | 0.0864 | likely_benign | 0.079 | benign | -0.708 | Destabilizing | 0.196 | N | 0.194 | neutral | N | 0.462555422 | None | None | N |
N/I | 0.1002 | likely_benign | 0.0905 | benign | 0.161 | Stabilizing | 0.033 | N | 0.322 | neutral | N | 0.513699339 | None | None | N |
N/K | 0.1387 | likely_benign | 0.1003 | benign | -0.16 | Destabilizing | None | N | 0.116 | neutral | N | 0.500922043 | None | None | N |
N/L | 0.1251 | likely_benign | 0.1115 | benign | 0.161 | Stabilizing | 0.018 | N | 0.264 | neutral | None | None | None | None | N |
N/M | 0.1826 | likely_benign | 0.1581 | benign | 0.565 | Stabilizing | 0.497 | N | 0.241 | neutral | None | None | None | None | N |
N/P | 0.4224 | ambiguous | 0.3954 | ambiguous | None | Stabilizing | 0.044 | N | 0.373 | neutral | None | None | None | None | N |
N/Q | 0.1561 | likely_benign | 0.1205 | benign | -0.489 | Destabilizing | 0.009 | N | 0.227 | neutral | None | None | None | None | N |
N/R | 0.1687 | likely_benign | 0.1267 | benign | -0.165 | Destabilizing | 0.009 | N | 0.226 | neutral | None | None | None | None | N |
N/S | 0.0643 | likely_benign | 0.0641 | benign | -0.306 | Destabilizing | None | N | 0.157 | neutral | N | 0.487011383 | None | None | N |
N/T | 0.0753 | likely_benign | 0.07 | benign | -0.159 | Destabilizing | 0.007 | N | 0.203 | neutral | N | 0.478989333 | None | None | N |
N/V | 0.1033 | likely_benign | 0.0887 | benign | None | Stabilizing | 0.009 | N | 0.283 | neutral | None | None | None | None | N |
N/W | 0.5246 | ambiguous | 0.4542 | ambiguous | -0.434 | Destabilizing | 0.788 | D | 0.22 | neutral | None | None | None | None | N |
N/Y | 0.1048 | likely_benign | 0.0989 | benign | -0.217 | Destabilizing | 0.196 | N | 0.291 | neutral | N | 0.513525981 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.