Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18738 | 56437;56438;56439 | chr2:178599689;178599688;178599687 | chr2:179464416;179464415;179464414 |
N2AB | 17097 | 51514;51515;51516 | chr2:178599689;178599688;178599687 | chr2:179464416;179464415;179464414 |
N2A | 16170 | 48733;48734;48735 | chr2:178599689;178599688;178599687 | chr2:179464416;179464415;179464414 |
N2B | 9673 | 29242;29243;29244 | chr2:178599689;178599688;178599687 | chr2:179464416;179464415;179464414 |
Novex-1 | 9798 | 29617;29618;29619 | chr2:178599689;178599688;178599687 | chr2:179464416;179464415;179464414 |
Novex-2 | 9865 | 29818;29819;29820 | chr2:178599689;178599688;178599687 | chr2:179464416;179464415;179464414 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/G | rs777956655 | -1.767 | 0.928 | N | 0.721 | 0.631 | None | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
V/G | rs777956655 | -1.767 | 0.928 | N | 0.721 | 0.631 | None | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
V/G | rs777956655 | -1.767 | 0.928 | N | 0.721 | 0.631 | None | gnomAD-4.0.0 | 8.97572E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.67667E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4513 | ambiguous | 0.4509 | ambiguous | -2.07 | Highly Destabilizing | 0.645 | D | 0.415 | neutral | D | 0.532502184 | None | None | N |
V/C | 0.7362 | likely_pathogenic | 0.7176 | pathogenic | -1.568 | Destabilizing | 0.995 | D | 0.647 | neutral | None | None | None | None | N |
V/D | 0.7594 | likely_pathogenic | 0.7711 | pathogenic | -2.992 | Highly Destabilizing | 0.928 | D | 0.74 | deleterious | N | 0.503017478 | None | None | N |
V/E | 0.5989 | likely_pathogenic | 0.6069 | pathogenic | -2.809 | Highly Destabilizing | 0.945 | D | 0.683 | prob.neutral | None | None | None | None | N |
V/F | 0.2664 | likely_benign | 0.2537 | benign | -1.331 | Destabilizing | 0.864 | D | 0.679 | prob.neutral | N | 0.480206494 | None | None | N |
V/G | 0.5378 | ambiguous | 0.5257 | ambiguous | -2.568 | Highly Destabilizing | 0.928 | D | 0.721 | prob.delet. | N | 0.493609729 | None | None | N |
V/H | 0.7831 | likely_pathogenic | 0.7789 | pathogenic | -2.521 | Highly Destabilizing | 0.995 | D | 0.714 | prob.delet. | None | None | None | None | N |
V/I | 0.0665 | likely_benign | 0.065 | benign | -0.689 | Destabilizing | 0.002 | N | 0.201 | neutral | N | 0.425257288 | None | None | N |
V/K | 0.5851 | likely_pathogenic | 0.6051 | pathogenic | -1.908 | Destabilizing | 0.945 | D | 0.686 | prob.neutral | None | None | None | None | N |
V/L | 0.2131 | likely_benign | 0.2229 | benign | -0.689 | Destabilizing | 0.114 | N | 0.372 | neutral | N | 0.495655949 | None | None | N |
V/M | 0.1793 | likely_benign | 0.1849 | benign | -0.595 | Destabilizing | 0.894 | D | 0.596 | neutral | None | None | None | None | N |
V/N | 0.5696 | likely_pathogenic | 0.5735 | pathogenic | -2.146 | Highly Destabilizing | 0.981 | D | 0.733 | prob.delet. | None | None | None | None | N |
V/P | 0.9366 | likely_pathogenic | 0.9358 | pathogenic | -1.123 | Destabilizing | 0.981 | D | 0.706 | prob.neutral | None | None | None | None | N |
V/Q | 0.5751 | likely_pathogenic | 0.5741 | pathogenic | -2.032 | Highly Destabilizing | 0.981 | D | 0.689 | prob.neutral | None | None | None | None | N |
V/R | 0.5493 | ambiguous | 0.5429 | ambiguous | -1.657 | Destabilizing | 0.945 | D | 0.73 | prob.delet. | None | None | None | None | N |
V/S | 0.524 | ambiguous | 0.5291 | ambiguous | -2.656 | Highly Destabilizing | 0.945 | D | 0.671 | neutral | None | None | None | None | N |
V/T | 0.3392 | likely_benign | 0.3604 | ambiguous | -2.35 | Highly Destabilizing | 0.707 | D | 0.507 | neutral | None | None | None | None | N |
V/W | 0.8569 | likely_pathogenic | 0.8412 | pathogenic | -1.972 | Destabilizing | 0.995 | D | 0.681 | prob.neutral | None | None | None | None | N |
V/Y | 0.6751 | likely_pathogenic | 0.6488 | pathogenic | -1.586 | Destabilizing | 0.945 | D | 0.686 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.