Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18746 | 56461;56462;56463 | chr2:178599665;178599664;178599663 | chr2:179464392;179464391;179464390 |
N2AB | 17105 | 51538;51539;51540 | chr2:178599665;178599664;178599663 | chr2:179464392;179464391;179464390 |
N2A | 16178 | 48757;48758;48759 | chr2:178599665;178599664;178599663 | chr2:179464392;179464391;179464390 |
N2B | 9681 | 29266;29267;29268 | chr2:178599665;178599664;178599663 | chr2:179464392;179464391;179464390 |
Novex-1 | 9806 | 29641;29642;29643 | chr2:178599665;178599664;178599663 | chr2:179464392;179464391;179464390 |
Novex-2 | 9873 | 29842;29843;29844 | chr2:178599665;178599664;178599663 | chr2:179464392;179464391;179464390 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.139 | N | 0.281 | 0.161 | 0.21279746466 | gnomAD-4.0.0 | 3.18579E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.72243E-06 | 0 | 0 |
T/I | rs762145585 | 0.178 | 0.784 | N | 0.496 | 0.228 | 0.315609569513 | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.59E-05 | None | 0 | None | 0 | 8.91E-06 | 0 |
T/I | rs762145585 | 0.178 | 0.784 | N | 0.496 | 0.228 | 0.315609569513 | gnomAD-4.0.0 | 1.59294E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86134E-06 | 0 | 0 |
T/P | None | None | 0.784 | N | 0.491 | 0.357 | 0.331365685468 | gnomAD-4.0.0 | 1.59289E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86121E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0865 | likely_benign | 0.0804 | benign | -0.801 | Destabilizing | 0.139 | N | 0.281 | neutral | N | 0.47185637 | None | None | I |
T/C | 0.316 | likely_benign | 0.2917 | benign | -0.622 | Destabilizing | 0.995 | D | 0.478 | neutral | None | None | None | None | I |
T/D | 0.3371 | likely_benign | 0.3027 | benign | -0.931 | Destabilizing | 0.704 | D | 0.453 | neutral | None | None | None | None | I |
T/E | 0.2606 | likely_benign | 0.236 | benign | -0.876 | Destabilizing | 0.495 | N | 0.452 | neutral | None | None | None | None | I |
T/F | 0.2159 | likely_benign | 0.1841 | benign | -0.694 | Destabilizing | 0.981 | D | 0.546 | neutral | None | None | None | None | I |
T/G | 0.2539 | likely_benign | 0.2284 | benign | -1.12 | Destabilizing | 0.329 | N | 0.526 | neutral | None | None | None | None | I |
T/H | 0.2206 | likely_benign | 0.1816 | benign | -1.481 | Destabilizing | 0.981 | D | 0.548 | neutral | None | None | None | None | I |
T/I | 0.1252 | likely_benign | 0.1234 | benign | -0.023 | Destabilizing | 0.784 | D | 0.496 | neutral | N | 0.453558611 | None | None | I |
T/K | 0.1777 | likely_benign | 0.1595 | benign | -0.892 | Destabilizing | 0.004 | N | 0.187 | neutral | None | None | None | None | I |
T/L | 0.1065 | likely_benign | 0.1 | benign | -0.023 | Destabilizing | 0.495 | N | 0.453 | neutral | None | None | None | None | I |
T/M | 0.0939 | likely_benign | 0.0922 | benign | 0.227 | Stabilizing | 0.981 | D | 0.497 | neutral | None | None | None | None | I |
T/N | 0.1152 | likely_benign | 0.1017 | benign | -1.062 | Destabilizing | 0.425 | N | 0.284 | neutral | N | 0.425622648 | None | None | I |
T/P | 0.6701 | likely_pathogenic | 0.6001 | pathogenic | -0.248 | Destabilizing | 0.784 | D | 0.491 | neutral | N | 0.493098434 | None | None | I |
T/Q | 0.2053 | likely_benign | 0.1871 | benign | -1.139 | Destabilizing | 0.704 | D | 0.449 | neutral | None | None | None | None | I |
T/R | 0.1704 | likely_benign | 0.1446 | benign | -0.775 | Destabilizing | 0.007 | N | 0.217 | neutral | None | None | None | None | I |
T/S | 0.0974 | likely_benign | 0.0892 | benign | -1.241 | Destabilizing | 0.01 | N | 0.13 | neutral | N | 0.394126305 | None | None | I |
T/V | 0.1171 | likely_benign | 0.1162 | benign | -0.248 | Destabilizing | 0.704 | D | 0.284 | neutral | None | None | None | None | I |
T/W | 0.6061 | likely_pathogenic | 0.5487 | ambiguous | -0.723 | Destabilizing | 0.995 | D | 0.551 | neutral | None | None | None | None | I |
T/Y | 0.2271 | likely_benign | 0.193 | benign | -0.447 | Destabilizing | 0.981 | D | 0.545 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.