Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18751 | 56476;56477;56478 | chr2:178599650;178599649;178599648 | chr2:179464377;179464376;179464375 |
N2AB | 17110 | 51553;51554;51555 | chr2:178599650;178599649;178599648 | chr2:179464377;179464376;179464375 |
N2A | 16183 | 48772;48773;48774 | chr2:178599650;178599649;178599648 | chr2:179464377;179464376;179464375 |
N2B | 9686 | 29281;29282;29283 | chr2:178599650;178599649;178599648 | chr2:179464377;179464376;179464375 |
Novex-1 | 9811 | 29656;29657;29658 | chr2:178599650;178599649;178599648 | chr2:179464377;179464376;179464375 |
Novex-2 | 9878 | 29857;29858;29859 | chr2:178599650;178599649;178599648 | chr2:179464377;179464376;179464375 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/F | None | None | 0.998 | D | 0.721 | 0.836 | 0.816700955439 | gnomAD-4.0.0 | 2.05369E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.73792E-04 | 0 | 2.32213E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9697 | likely_pathogenic | 0.9507 | pathogenic | -2.927 | Highly Destabilizing | 0.992 | D | 0.695 | prob.neutral | None | None | None | None | N |
I/C | 0.9613 | likely_pathogenic | 0.9294 | pathogenic | -2.491 | Highly Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
I/D | 0.9935 | likely_pathogenic | 0.9909 | pathogenic | -3.793 | Highly Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
I/E | 0.9904 | likely_pathogenic | 0.9854 | pathogenic | -3.592 | Highly Destabilizing | 1.0 | D | 0.872 | deleterious | None | None | None | None | N |
I/F | 0.4372 | ambiguous | 0.3283 | benign | -1.794 | Destabilizing | 0.998 | D | 0.721 | prob.delet. | D | 0.572953343 | None | None | N |
I/G | 0.9935 | likely_pathogenic | 0.9884 | pathogenic | -3.446 | Highly Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
I/H | 0.9656 | likely_pathogenic | 0.9401 | pathogenic | -2.95 | Highly Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | N |
I/K | 0.9734 | likely_pathogenic | 0.9501 | pathogenic | -2.58 | Highly Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
I/L | 0.2394 | likely_benign | 0.1992 | benign | -1.416 | Destabilizing | 0.889 | D | 0.376 | neutral | D | 0.572240189 | None | None | N |
I/M | 0.3259 | likely_benign | 0.2542 | benign | -1.401 | Destabilizing | 0.998 | D | 0.689 | prob.neutral | D | 0.59228373 | None | None | N |
I/N | 0.9033 | likely_pathogenic | 0.8585 | pathogenic | -2.961 | Highly Destabilizing | 0.999 | D | 0.882 | deleterious | D | 0.619234471 | None | None | N |
I/P | 0.9921 | likely_pathogenic | 0.9878 | pathogenic | -1.903 | Destabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | N |
I/Q | 0.972 | likely_pathogenic | 0.9532 | pathogenic | -2.845 | Highly Destabilizing | 1.0 | D | 0.89 | deleterious | None | None | None | None | N |
I/R | 0.9626 | likely_pathogenic | 0.9322 | pathogenic | -2.135 | Highly Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
I/S | 0.9462 | likely_pathogenic | 0.9159 | pathogenic | -3.55 | Highly Destabilizing | 0.998 | D | 0.843 | deleterious | D | 0.60971572 | None | None | N |
I/T | 0.9567 | likely_pathogenic | 0.9306 | pathogenic | -3.219 | Highly Destabilizing | 0.989 | D | 0.753 | deleterious | D | 0.618830863 | None | None | N |
I/V | 0.2463 | likely_benign | 0.1941 | benign | -1.903 | Destabilizing | 0.333 | N | 0.259 | neutral | D | 0.547113422 | None | None | N |
I/W | 0.9725 | likely_pathogenic | 0.9523 | pathogenic | -2.297 | Highly Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
I/Y | 0.9142 | likely_pathogenic | 0.8546 | pathogenic | -2.09 | Highly Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.