Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18818 | 56677;56678;56679 | chr2:178599341;178599340;178599339 | chr2:179464068;179464067;179464066 |
N2AB | 17177 | 51754;51755;51756 | chr2:178599341;178599340;178599339 | chr2:179464068;179464067;179464066 |
N2A | 16250 | 48973;48974;48975 | chr2:178599341;178599340;178599339 | chr2:179464068;179464067;179464066 |
N2B | 9753 | 29482;29483;29484 | chr2:178599341;178599340;178599339 | chr2:179464068;179464067;179464066 |
Novex-1 | 9878 | 29857;29858;29859 | chr2:178599341;178599340;178599339 | chr2:179464068;179464067;179464066 |
Novex-2 | 9945 | 30058;30059;30060 | chr2:178599341;178599340;178599339 | chr2:179464068;179464067;179464066 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/K | rs945270235 | -0.395 | 1.0 | N | 0.823 | 0.447 | 0.520110530135 | gnomAD-2.1.1 | 4.1E-06 | None | None | None | None | I | None | 0 | 2.97E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
T/K | rs945270235 | -0.395 | 1.0 | N | 0.823 | 0.447 | 0.520110530135 | gnomAD-4.0.0 | 1.60193E-06 | None | None | None | None | I | None | 0 | 2.32515E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.2672 | likely_benign | 0.2523 | benign | -0.7 | Destabilizing | 0.999 | D | 0.549 | neutral | N | 0.488324632 | None | None | I |
T/C | 0.7623 | likely_pathogenic | 0.746 | pathogenic | -0.458 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | I |
T/D | 0.7453 | likely_pathogenic | 0.7051 | pathogenic | -0.581 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | I |
T/E | 0.6439 | likely_pathogenic | 0.59 | pathogenic | -0.604 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | I |
T/F | 0.6787 | likely_pathogenic | 0.6108 | pathogenic | -0.862 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | I |
T/G | 0.5523 | ambiguous | 0.505 | ambiguous | -0.931 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | I |
T/H | 0.64 | likely_pathogenic | 0.5782 | pathogenic | -1.271 | Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | I |
T/I | 0.4829 | ambiguous | 0.4252 | ambiguous | -0.181 | Destabilizing | 1.0 | D | 0.815 | deleterious | N | 0.498127746 | None | None | I |
T/K | 0.5852 | likely_pathogenic | 0.5253 | ambiguous | -0.825 | Destabilizing | 1.0 | D | 0.823 | deleterious | N | 0.47218216 | None | None | I |
T/L | 0.2486 | likely_benign | 0.2164 | benign | -0.181 | Destabilizing | 0.999 | D | 0.745 | deleterious | None | None | None | None | I |
T/M | 0.1889 | likely_benign | 0.1705 | benign | 0.209 | Stabilizing | 1.0 | D | 0.728 | prob.delet. | None | None | None | None | I |
T/N | 0.3064 | likely_benign | 0.2755 | benign | -0.754 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | I |
T/P | 0.8349 | likely_pathogenic | 0.7961 | pathogenic | -0.322 | Destabilizing | 1.0 | D | 0.808 | deleterious | N | 0.516597104 | None | None | I |
T/Q | 0.5113 | ambiguous | 0.4552 | ambiguous | -0.995 | Destabilizing | 1.0 | D | 0.806 | deleterious | None | None | None | None | I |
T/R | 0.5288 | ambiguous | 0.4727 | ambiguous | -0.501 | Destabilizing | 1.0 | D | 0.805 | deleterious | N | 0.474259301 | None | None | I |
T/S | 0.1948 | likely_benign | 0.1849 | benign | -0.949 | Destabilizing | 0.999 | D | 0.564 | neutral | N | 0.516481434 | None | None | I |
T/V | 0.3931 | ambiguous | 0.3527 | ambiguous | -0.322 | Destabilizing | 0.999 | D | 0.651 | neutral | None | None | None | None | I |
T/W | 0.8854 | likely_pathogenic | 0.8507 | pathogenic | -0.812 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | I |
T/Y | 0.7341 | likely_pathogenic | 0.6655 | pathogenic | -0.58 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.