Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18822 | 56689;56690;56691 | chr2:178599329;178599328;178599327 | chr2:179464056;179464055;179464054 |
N2AB | 17181 | 51766;51767;51768 | chr2:178599329;178599328;178599327 | chr2:179464056;179464055;179464054 |
N2A | 16254 | 48985;48986;48987 | chr2:178599329;178599328;178599327 | chr2:179464056;179464055;179464054 |
N2B | 9757 | 29494;29495;29496 | chr2:178599329;178599328;178599327 | chr2:179464056;179464055;179464054 |
Novex-1 | 9882 | 29869;29870;29871 | chr2:178599329;178599328;178599327 | chr2:179464056;179464055;179464054 |
Novex-2 | 9949 | 30070;30071;30072 | chr2:178599329;178599328;178599327 | chr2:179464056;179464055;179464054 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs771542159 | -3.427 | 0.001 | N | 0.624 | 0.387 | 0.612226609336 | gnomAD-2.1.1 | 4.07E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.99E-06 | 0 |
I/T | rs771542159 | -3.427 | 0.001 | N | 0.624 | 0.387 | 0.612226609336 | gnomAD-4.0.0 | 5.48643E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.40289E-06 | 0 | 3.32049E-05 |
I/V | None | None | None | N | 0.155 | 0.055 | 0.356484672536 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8377 | likely_pathogenic | 0.8414 | pathogenic | -3.089 | Highly Destabilizing | 0.116 | N | 0.637 | neutral | None | None | None | None | N |
I/C | 0.9572 | likely_pathogenic | 0.9497 | pathogenic | -2.36 | Highly Destabilizing | 0.944 | D | 0.794 | deleterious | None | None | None | None | N |
I/D | 0.9989 | likely_pathogenic | 0.9986 | pathogenic | -3.662 | Highly Destabilizing | 0.69 | D | 0.824 | deleterious | None | None | None | None | N |
I/E | 0.9954 | likely_pathogenic | 0.9948 | pathogenic | -3.353 | Highly Destabilizing | 0.69 | D | 0.819 | deleterious | None | None | None | None | N |
I/F | 0.6465 | likely_pathogenic | 0.6154 | pathogenic | -1.798 | Destabilizing | 0.627 | D | 0.599 | neutral | D | 0.522467043 | None | None | N |
I/G | 0.9893 | likely_pathogenic | 0.989 | pathogenic | -3.649 | Highly Destabilizing | 0.388 | N | 0.813 | deleterious | None | None | None | None | N |
I/H | 0.9962 | likely_pathogenic | 0.995 | pathogenic | -3.242 | Highly Destabilizing | 0.981 | D | 0.876 | deleterious | None | None | None | None | N |
I/K | 0.9912 | likely_pathogenic | 0.9892 | pathogenic | -2.457 | Highly Destabilizing | 0.69 | D | 0.817 | deleterious | None | None | None | None | N |
I/L | 0.1953 | likely_benign | 0.1905 | benign | -1.373 | Destabilizing | 0.041 | N | 0.324 | neutral | N | 0.450509945 | None | None | N |
I/M | 0.2661 | likely_benign | 0.2522 | benign | -1.693 | Destabilizing | 0.627 | D | 0.571 | neutral | N | 0.484359202 | None | None | N |
I/N | 0.9904 | likely_pathogenic | 0.9872 | pathogenic | -3.174 | Highly Destabilizing | 0.627 | D | 0.856 | deleterious | D | 0.522720533 | None | None | N |
I/P | 0.9924 | likely_pathogenic | 0.9928 | pathogenic | -1.942 | Destabilizing | 0.818 | D | 0.849 | deleterious | None | None | None | None | N |
I/Q | 0.9922 | likely_pathogenic | 0.9904 | pathogenic | -2.819 | Highly Destabilizing | 0.818 | D | 0.87 | deleterious | None | None | None | None | N |
I/R | 0.9856 | likely_pathogenic | 0.9825 | pathogenic | -2.469 | Highly Destabilizing | 0.69 | D | 0.863 | deleterious | None | None | None | None | N |
I/S | 0.9696 | likely_pathogenic | 0.9652 | pathogenic | -3.652 | Highly Destabilizing | 0.193 | N | 0.752 | deleterious | D | 0.522720533 | None | None | N |
I/T | 0.7939 | likely_pathogenic | 0.7894 | pathogenic | -3.193 | Highly Destabilizing | 0.001 | N | 0.624 | neutral | N | 0.511110738 | None | None | N |
I/V | 0.0941 | likely_benign | 0.0998 | benign | -1.942 | Destabilizing | None | N | 0.155 | neutral | N | 0.402072919 | None | None | N |
I/W | 0.9892 | likely_pathogenic | 0.9862 | pathogenic | -2.109 | Highly Destabilizing | 0.981 | D | 0.859 | deleterious | None | None | None | None | N |
I/Y | 0.9759 | likely_pathogenic | 0.9706 | pathogenic | -2.066 | Highly Destabilizing | 0.818 | D | 0.763 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.