Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1883 | 5872;5873;5874 | chr2:178776217;178776216;178776215 | chr2:179640944;179640943;179640942 |
N2AB | 1883 | 5872;5873;5874 | chr2:178776217;178776216;178776215 | chr2:179640944;179640943;179640942 |
N2A | 1883 | 5872;5873;5874 | chr2:178776217;178776216;178776215 | chr2:179640944;179640943;179640942 |
N2B | 1837 | 5734;5735;5736 | chr2:178776217;178776216;178776215 | chr2:179640944;179640943;179640942 |
Novex-1 | 1837 | 5734;5735;5736 | chr2:178776217;178776216;178776215 | chr2:179640944;179640943;179640942 |
Novex-2 | 1837 | 5734;5735;5736 | chr2:178776217;178776216;178776215 | chr2:179640944;179640943;179640942 |
Novex-3 | 1883 | 5872;5873;5874 | chr2:178776217;178776216;178776215 | chr2:179640944;179640943;179640942 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | None | None | 1.0 | N | 0.653 | 0.53 | 0.516381326315 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9252 | likely_pathogenic | 0.9013 | pathogenic | 0.024 | Stabilizing | 0.999 | D | 0.645 | neutral | None | None | None | None | N |
K/C | 0.9795 | likely_pathogenic | 0.9801 | pathogenic | -0.374 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | N |
K/D | 0.9719 | likely_pathogenic | 0.9623 | pathogenic | 0.022 | Stabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
K/E | 0.9192 | likely_pathogenic | 0.8803 | pathogenic | 0.024 | Stabilizing | 0.999 | D | 0.644 | neutral | N | 0.470705775 | None | None | N |
K/F | 0.9908 | likely_pathogenic | 0.9897 | pathogenic | -0.234 | Destabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | N |
K/G | 0.9247 | likely_pathogenic | 0.9106 | pathogenic | -0.148 | Destabilizing | 1.0 | D | 0.593 | neutral | None | None | None | None | N |
K/H | 0.8158 | likely_pathogenic | 0.7861 | pathogenic | -0.341 | Destabilizing | 1.0 | D | 0.651 | neutral | None | None | None | None | N |
K/I | 0.9614 | likely_pathogenic | 0.9575 | pathogenic | 0.395 | Stabilizing | 1.0 | D | 0.69 | prob.neutral | N | 0.514648534 | None | None | N |
K/L | 0.9267 | likely_pathogenic | 0.9116 | pathogenic | 0.395 | Stabilizing | 1.0 | D | 0.593 | neutral | None | None | None | None | N |
K/M | 0.9112 | likely_pathogenic | 0.8863 | pathogenic | 0.106 | Stabilizing | 1.0 | D | 0.644 | neutral | None | None | None | None | N |
K/N | 0.9305 | likely_pathogenic | 0.9074 | pathogenic | 0.079 | Stabilizing | 1.0 | D | 0.687 | prob.neutral | N | 0.47956244 | None | None | N |
K/P | 0.899 | likely_pathogenic | 0.8868 | pathogenic | 0.298 | Stabilizing | 1.0 | D | 0.66 | neutral | None | None | None | None | N |
K/Q | 0.6327 | likely_pathogenic | 0.5538 | ambiguous | -0.071 | Destabilizing | 1.0 | D | 0.663 | neutral | N | 0.473016192 | None | None | N |
K/R | 0.1742 | likely_benign | 0.1696 | benign | -0.076 | Destabilizing | 0.999 | D | 0.573 | neutral | N | 0.490022264 | None | None | N |
K/S | 0.9364 | likely_pathogenic | 0.9178 | pathogenic | -0.378 | Destabilizing | 0.999 | D | 0.629 | neutral | None | None | None | None | N |
K/T | 0.8562 | likely_pathogenic | 0.8266 | pathogenic | -0.236 | Destabilizing | 1.0 | D | 0.653 | neutral | N | 0.492245011 | None | None | N |
K/V | 0.9374 | likely_pathogenic | 0.9304 | pathogenic | 0.298 | Stabilizing | 1.0 | D | 0.656 | neutral | None | None | None | None | N |
K/W | 0.9847 | likely_pathogenic | 0.984 | pathogenic | -0.28 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | N |
K/Y | 0.9647 | likely_pathogenic | 0.9621 | pathogenic | 0.083 | Stabilizing | 1.0 | D | 0.648 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.