Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18831 | 56716;56717;56718 | chr2:178599302;178599301;178599300 | chr2:179464029;179464028;179464027 |
N2AB | 17190 | 51793;51794;51795 | chr2:178599302;178599301;178599300 | chr2:179464029;179464028;179464027 |
N2A | 16263 | 49012;49013;49014 | chr2:178599302;178599301;178599300 | chr2:179464029;179464028;179464027 |
N2B | 9766 | 29521;29522;29523 | chr2:178599302;178599301;178599300 | chr2:179464029;179464028;179464027 |
Novex-1 | 9891 | 29896;29897;29898 | chr2:178599302;178599301;178599300 | chr2:179464029;179464028;179464027 |
Novex-2 | 9958 | 30097;30098;30099 | chr2:178599302;178599301;178599300 | chr2:179464029;179464028;179464027 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.64 | N | 0.403 | 0.122 | 0.176091768786 | gnomAD-4.0.0 | 6.86315E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00763E-07 | 0 | 0 |
T/S | rs778893070 | -0.498 | 0.251 | N | 0.219 | 0.12 | 0.141422826196 | gnomAD-2.1.1 | 4.09E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9E-06 | 0 |
T/S | rs778893070 | -0.498 | 0.251 | N | 0.219 | 0.12 | 0.141422826196 | gnomAD-4.0.0 | 6.86315E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00763E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0977 | likely_benign | 0.1013 | benign | -0.298 | Destabilizing | 0.64 | D | 0.403 | neutral | N | 0.476074819 | None | None | I |
T/C | 0.4858 | ambiguous | 0.5081 | ambiguous | -0.398 | Destabilizing | 0.999 | D | 0.446 | neutral | None | None | None | None | I |
T/D | 0.526 | ambiguous | 0.497 | ambiguous | 0.219 | Stabilizing | 0.976 | D | 0.378 | neutral | None | None | None | None | I |
T/E | 0.4729 | ambiguous | 0.4361 | ambiguous | 0.172 | Stabilizing | 0.976 | D | 0.379 | neutral | None | None | None | None | I |
T/F | 0.2722 | likely_benign | 0.2853 | benign | -0.727 | Destabilizing | 0.976 | D | 0.523 | neutral | None | None | None | None | I |
T/G | 0.2496 | likely_benign | 0.2575 | benign | -0.442 | Destabilizing | 0.919 | D | 0.455 | neutral | None | None | None | None | I |
T/H | 0.3137 | likely_benign | 0.3224 | benign | -0.531 | Destabilizing | 0.999 | D | 0.551 | neutral | None | None | None | None | I |
T/I | 0.1906 | likely_benign | 0.2012 | benign | -0.033 | Destabilizing | 0.938 | D | 0.379 | neutral | N | 0.492641782 | None | None | I |
T/K | 0.3659 | ambiguous | 0.3542 | ambiguous | -0.347 | Destabilizing | 0.968 | D | 0.37 | neutral | N | 0.451312447 | None | None | I |
T/L | 0.1145 | likely_benign | 0.1193 | benign | -0.033 | Destabilizing | 0.034 | N | 0.289 | neutral | None | None | None | None | I |
T/M | 0.0941 | likely_benign | 0.1007 | benign | -0.207 | Destabilizing | 0.976 | D | 0.407 | neutral | None | None | None | None | I |
T/N | 0.1153 | likely_benign | 0.1262 | benign | -0.209 | Destabilizing | 0.976 | D | 0.336 | neutral | None | None | None | None | I |
T/P | 0.2762 | likely_benign | 0.2391 | benign | -0.092 | Destabilizing | 0.984 | D | 0.405 | neutral | N | 0.491948348 | None | None | I |
T/Q | 0.296 | likely_benign | 0.2949 | benign | -0.347 | Destabilizing | 0.988 | D | 0.392 | neutral | None | None | None | None | I |
T/R | 0.3346 | likely_benign | 0.3239 | benign | -0.054 | Destabilizing | 0.984 | D | 0.408 | neutral | N | 0.447792139 | None | None | I |
T/S | 0.1258 | likely_benign | 0.1324 | benign | -0.416 | Destabilizing | 0.251 | N | 0.219 | neutral | N | 0.430435743 | None | None | I |
T/V | 0.1531 | likely_benign | 0.154 | benign | -0.092 | Destabilizing | 0.851 | D | 0.345 | neutral | None | None | None | None | I |
T/W | 0.6471 | likely_pathogenic | 0.646 | pathogenic | -0.793 | Destabilizing | 0.999 | D | 0.629 | neutral | None | None | None | None | I |
T/Y | 0.2895 | likely_benign | 0.2879 | benign | -0.488 | Destabilizing | 0.996 | D | 0.536 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.