Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC1883156716;56717;56718 chr2:178599302;178599301;178599300chr2:179464029;179464028;179464027
N2AB1719051793;51794;51795 chr2:178599302;178599301;178599300chr2:179464029;179464028;179464027
N2A1626349012;49013;49014 chr2:178599302;178599301;178599300chr2:179464029;179464028;179464027
N2B976629521;29522;29523 chr2:178599302;178599301;178599300chr2:179464029;179464028;179464027
Novex-1989129896;29897;29898 chr2:178599302;178599301;178599300chr2:179464029;179464028;179464027
Novex-2995830097;30098;30099 chr2:178599302;178599301;178599300chr2:179464029;179464028;179464027
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: T
  • RefSeq wild type transcript codon: ACA
  • RefSeq wild type template codon: TGT
  • Domain: Fn3-24
  • Domain position: 48
  • Structural Position: 64
  • Q(SASA): 0.5818
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
T/A None None 0.64 N 0.403 0.122 0.176091768786 gnomAD-4.0.0 6.86315E-07 None None None None I None 0 0 None 0 0 None 0 0 9.00763E-07 0 0
T/S rs778893070 -0.498 0.251 N 0.219 0.12 0.141422826196 gnomAD-2.1.1 4.09E-06 None None None None I None 0 0 None 0 0 None 0 None 0 9E-06 0
T/S rs778893070 -0.498 0.251 N 0.219 0.12 0.141422826196 gnomAD-4.0.0 6.86315E-07 None None None None I None 0 0 None 0 0 None 0 0 9.00763E-07 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
T/A 0.0977 likely_benign 0.1013 benign -0.298 Destabilizing 0.64 D 0.403 neutral N 0.476074819 None None I
T/C 0.4858 ambiguous 0.5081 ambiguous -0.398 Destabilizing 0.999 D 0.446 neutral None None None None I
T/D 0.526 ambiguous 0.497 ambiguous 0.219 Stabilizing 0.976 D 0.378 neutral None None None None I
T/E 0.4729 ambiguous 0.4361 ambiguous 0.172 Stabilizing 0.976 D 0.379 neutral None None None None I
T/F 0.2722 likely_benign 0.2853 benign -0.727 Destabilizing 0.976 D 0.523 neutral None None None None I
T/G 0.2496 likely_benign 0.2575 benign -0.442 Destabilizing 0.919 D 0.455 neutral None None None None I
T/H 0.3137 likely_benign 0.3224 benign -0.531 Destabilizing 0.999 D 0.551 neutral None None None None I
T/I 0.1906 likely_benign 0.2012 benign -0.033 Destabilizing 0.938 D 0.379 neutral N 0.492641782 None None I
T/K 0.3659 ambiguous 0.3542 ambiguous -0.347 Destabilizing 0.968 D 0.37 neutral N 0.451312447 None None I
T/L 0.1145 likely_benign 0.1193 benign -0.033 Destabilizing 0.034 N 0.289 neutral None None None None I
T/M 0.0941 likely_benign 0.1007 benign -0.207 Destabilizing 0.976 D 0.407 neutral None None None None I
T/N 0.1153 likely_benign 0.1262 benign -0.209 Destabilizing 0.976 D 0.336 neutral None None None None I
T/P 0.2762 likely_benign 0.2391 benign -0.092 Destabilizing 0.984 D 0.405 neutral N 0.491948348 None None I
T/Q 0.296 likely_benign 0.2949 benign -0.347 Destabilizing 0.988 D 0.392 neutral None None None None I
T/R 0.3346 likely_benign 0.3239 benign -0.054 Destabilizing 0.984 D 0.408 neutral N 0.447792139 None None I
T/S 0.1258 likely_benign 0.1324 benign -0.416 Destabilizing 0.251 N 0.219 neutral N 0.430435743 None None I
T/V 0.1531 likely_benign 0.154 benign -0.092 Destabilizing 0.851 D 0.345 neutral None None None None I
T/W 0.6471 likely_pathogenic 0.646 pathogenic -0.793 Destabilizing 0.999 D 0.629 neutral None None None None I
T/Y 0.2895 likely_benign 0.2879 benign -0.488 Destabilizing 0.996 D 0.536 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.