Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18854 | 56785;56786;56787 | chr2:178599233;178599232;178599231 | chr2:179463960;179463959;179463958 |
N2AB | 17213 | 51862;51863;51864 | chr2:178599233;178599232;178599231 | chr2:179463960;179463959;179463958 |
N2A | 16286 | 49081;49082;49083 | chr2:178599233;178599232;178599231 | chr2:179463960;179463959;179463958 |
N2B | 9789 | 29590;29591;29592 | chr2:178599233;178599232;178599231 | chr2:179463960;179463959;179463958 |
Novex-1 | 9914 | 29965;29966;29967 | chr2:178599233;178599232;178599231 | chr2:179463960;179463959;179463958 |
Novex-2 | 9981 | 30166;30167;30168 | chr2:178599233;178599232;178599231 | chr2:179463960;179463959;179463958 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/V | None | None | 0.994 | N | 0.799 | 0.443 | 0.486779940545 | gnomAD-4.0.0 | 1.43365E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.39454E-05 | 1.73762E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2388 | likely_benign | 0.2089 | benign | -0.942 | Destabilizing | 0.958 | D | 0.667 | neutral | N | 0.477511304 | None | None | N |
E/C | 0.8532 | likely_pathogenic | 0.8309 | pathogenic | -0.532 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
E/D | 0.2513 | likely_benign | 0.2088 | benign | -1.13 | Destabilizing | 0.067 | N | 0.207 | neutral | N | 0.472560553 | None | None | N |
E/F | 0.8866 | likely_pathogenic | 0.8763 | pathogenic | -0.427 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
E/G | 0.3539 | ambiguous | 0.3134 | benign | -1.316 | Destabilizing | 0.988 | D | 0.754 | deleterious | N | 0.48172804 | None | None | N |
E/H | 0.5554 | ambiguous | 0.5267 | ambiguous | -0.786 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | N |
E/I | 0.4606 | ambiguous | 0.4538 | ambiguous | 0.081 | Stabilizing | 0.995 | D | 0.807 | deleterious | None | None | None | None | N |
E/K | 0.1922 | likely_benign | 0.1834 | benign | -0.85 | Destabilizing | 0.958 | D | 0.553 | neutral | N | 0.51222762 | None | None | N |
E/L | 0.542 | ambiguous | 0.5129 | ambiguous | 0.081 | Stabilizing | 0.995 | D | 0.803 | deleterious | None | None | None | None | N |
E/M | 0.5612 | ambiguous | 0.5568 | ambiguous | 0.574 | Stabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | N |
E/N | 0.3845 | ambiguous | 0.3333 | benign | -1.231 | Destabilizing | 0.982 | D | 0.712 | prob.delet. | None | None | None | None | N |
E/P | 0.671 | likely_pathogenic | 0.5788 | pathogenic | -0.239 | Destabilizing | 0.995 | D | 0.811 | deleterious | None | None | None | None | N |
E/Q | 0.1308 | likely_benign | 0.1286 | benign | -1.083 | Destabilizing | 0.994 | D | 0.654 | neutral | N | 0.497028881 | None | None | N |
E/R | 0.2994 | likely_benign | 0.2817 | benign | -0.588 | Destabilizing | 0.995 | D | 0.722 | prob.delet. | None | None | None | None | N |
E/S | 0.2707 | likely_benign | 0.2312 | benign | -1.584 | Destabilizing | 0.968 | D | 0.597 | neutral | None | None | None | None | N |
E/T | 0.2585 | likely_benign | 0.2422 | benign | -1.279 | Destabilizing | 0.991 | D | 0.773 | deleterious | None | None | None | None | N |
E/V | 0.2913 | likely_benign | 0.277 | benign | -0.239 | Destabilizing | 0.994 | D | 0.799 | deleterious | N | 0.469308551 | None | None | N |
E/W | 0.9532 | likely_pathogenic | 0.9525 | pathogenic | -0.212 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
E/Y | 0.7938 | likely_pathogenic | 0.7775 | pathogenic | -0.2 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.