Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18860 | 56803;56804;56805 | chr2:178599215;178599214;178599213 | chr2:179463942;179463941;179463940 |
N2AB | 17219 | 51880;51881;51882 | chr2:178599215;178599214;178599213 | chr2:179463942;179463941;179463940 |
N2A | 16292 | 49099;49100;49101 | chr2:178599215;178599214;178599213 | chr2:179463942;179463941;179463940 |
N2B | 9795 | 29608;29609;29610 | chr2:178599215;178599214;178599213 | chr2:179463942;179463941;179463940 |
Novex-1 | 9920 | 29983;29984;29985 | chr2:178599215;178599214;178599213 | chr2:179463942;179463941;179463940 |
Novex-2 | 9987 | 30184;30185;30186 | chr2:178599215;178599214;178599213 | chr2:179463942;179463941;179463940 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/T | rs1384923019 | None | 0.979 | N | 0.685 | 0.33 | 0.643685692495 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
M/T | rs1384923019 | None | 0.979 | N | 0.685 | 0.33 | 0.643685692495 | gnomAD-4.0.0 | 2.62433E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.62988E-06 | 1.3832E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.4397 | ambiguous | 0.3812 | ambiguous | -2.524 | Highly Destabilizing | 0.963 | D | 0.677 | prob.neutral | None | None | None | None | N |
M/C | 0.5557 | ambiguous | 0.4981 | ambiguous | -2.357 | Highly Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | N |
M/D | 0.9736 | likely_pathogenic | 0.9546 | pathogenic | -2.414 | Highly Destabilizing | 0.995 | D | 0.695 | prob.neutral | None | None | None | None | N |
M/E | 0.7659 | likely_pathogenic | 0.6689 | pathogenic | -2.258 | Highly Destabilizing | 0.969 | D | 0.641 | neutral | None | None | None | None | N |
M/F | 0.4653 | ambiguous | 0.3622 | ambiguous | -1.02 | Destabilizing | 0.999 | D | 0.721 | prob.delet. | None | None | None | None | N |
M/G | 0.7681 | likely_pathogenic | 0.675 | pathogenic | -2.908 | Highly Destabilizing | 0.984 | D | 0.657 | neutral | None | None | None | None | N |
M/H | 0.5626 | ambiguous | 0.477 | ambiguous | -2.348 | Highly Destabilizing | 0.999 | D | 0.671 | neutral | None | None | None | None | N |
M/I | 0.7102 | likely_pathogenic | 0.5773 | pathogenic | -1.433 | Destabilizing | 0.993 | D | 0.743 | deleterious | N | 0.453120601 | None | None | N |
M/K | 0.1919 | likely_benign | 0.1424 | benign | -1.827 | Destabilizing | 0.921 | D | 0.688 | prob.neutral | N | 0.444095686 | None | None | N |
M/L | 0.2839 | likely_benign | 0.2283 | benign | -1.433 | Destabilizing | 0.895 | D | 0.521 | neutral | N | 0.47234108 | None | None | N |
M/N | 0.7759 | likely_pathogenic | 0.6959 | pathogenic | -1.96 | Destabilizing | 0.995 | D | 0.684 | prob.neutral | None | None | None | None | N |
M/P | 0.9964 | likely_pathogenic | 0.994 | pathogenic | -1.78 | Destabilizing | 0.999 | D | 0.678 | prob.neutral | None | None | None | None | N |
M/Q | 0.2481 | likely_benign | 0.2072 | benign | -1.822 | Destabilizing | 0.969 | D | 0.715 | prob.delet. | None | None | None | None | N |
M/R | 0.1677 | likely_benign | 0.1329 | benign | -1.604 | Destabilizing | 0.068 | N | 0.475 | neutral | N | 0.399208759 | None | None | N |
M/S | 0.4016 | ambiguous | 0.3577 | ambiguous | -2.493 | Highly Destabilizing | 0.984 | D | 0.685 | prob.neutral | None | None | None | None | N |
M/T | 0.2495 | likely_benign | 0.2071 | benign | -2.245 | Highly Destabilizing | 0.979 | D | 0.685 | prob.neutral | N | 0.453773962 | None | None | N |
M/V | 0.1947 | likely_benign | 0.1631 | benign | -1.78 | Destabilizing | 0.951 | D | 0.749 | deleterious | N | 0.446405273 | None | None | N |
M/W | 0.7741 | likely_pathogenic | 0.6717 | pathogenic | -1.271 | Destabilizing | 1.0 | D | 0.684 | prob.neutral | None | None | None | None | N |
M/Y | 0.714 | likely_pathogenic | 0.5972 | pathogenic | -1.327 | Destabilizing | 0.999 | D | 0.719 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.