Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18876 | 56851;56852;56853 | chr2:178599167;178599166;178599165 | chr2:179463894;179463893;179463892 |
N2AB | 17235 | 51928;51929;51930 | chr2:178599167;178599166;178599165 | chr2:179463894;179463893;179463892 |
N2A | 16308 | 49147;49148;49149 | chr2:178599167;178599166;178599165 | chr2:179463894;179463893;179463892 |
N2B | 9811 | 29656;29657;29658 | chr2:178599167;178599166;178599165 | chr2:179463894;179463893;179463892 |
Novex-1 | 9936 | 30031;30032;30033 | chr2:178599167;178599166;178599165 | chr2:179463894;179463893;179463892 |
Novex-2 | 10003 | 30232;30233;30234 | chr2:178599167;178599166;178599165 | chr2:179463894;179463893;179463892 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs2052624292 | None | 0.976 | N | 0.615 | 0.191 | 0.299427821978 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/G | rs2052624292 | None | 0.976 | N | 0.615 | 0.191 | 0.299427821978 | gnomAD-4.0.0 | 6.57419E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47067E-05 | 0 | 0 |
E/K | rs919241154 | None | 0.954 | N | 0.481 | 0.185 | 0.256793551483 | gnomAD-4.0.0 | 3.69056E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.70007E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1912 | likely_benign | 0.195 | benign | -0.377 | Destabilizing | 0.954 | D | 0.515 | neutral | N | 0.50162105 | None | None | N |
E/C | 0.7432 | likely_pathogenic | 0.7163 | pathogenic | -0.35 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
E/D | 0.5583 | ambiguous | 0.6091 | pathogenic | -1.103 | Destabilizing | 0.976 | D | 0.449 | neutral | N | 0.503007917 | None | None | N |
E/F | 0.7928 | likely_pathogenic | 0.7888 | pathogenic | 0.467 | Stabilizing | 0.999 | D | 0.747 | deleterious | None | None | None | None | N |
E/G | 0.4194 | ambiguous | 0.4319 | ambiguous | -0.772 | Destabilizing | 0.976 | D | 0.615 | neutral | N | 0.484248798 | None | None | N |
E/H | 0.6379 | likely_pathogenic | 0.6306 | pathogenic | 0.354 | Stabilizing | 0.997 | D | 0.595 | neutral | None | None | None | None | N |
E/I | 0.2789 | likely_benign | 0.2787 | benign | 0.702 | Stabilizing | 0.997 | D | 0.76 | deleterious | None | None | None | None | N |
E/K | 0.2155 | likely_benign | 0.2035 | benign | -0.295 | Destabilizing | 0.954 | D | 0.481 | neutral | N | 0.5026612 | None | None | N |
E/L | 0.4489 | ambiguous | 0.4471 | ambiguous | 0.702 | Stabilizing | 0.997 | D | 0.699 | prob.delet. | None | None | None | None | N |
E/M | 0.4151 | ambiguous | 0.3958 | ambiguous | 0.899 | Stabilizing | 1.0 | D | 0.669 | prob.neutral | None | None | None | None | N |
E/N | 0.6339 | likely_pathogenic | 0.6425 | pathogenic | -0.971 | Destabilizing | 0.995 | D | 0.629 | neutral | None | None | None | None | N |
E/P | 0.9781 | likely_pathogenic | 0.983 | pathogenic | 0.365 | Stabilizing | 0.997 | D | 0.662 | prob.neutral | None | None | None | None | N |
E/Q | 0.1483 | likely_benign | 0.1425 | benign | -0.764 | Destabilizing | 0.787 | D | 0.315 | neutral | N | 0.5026612 | None | None | N |
E/R | 0.362 | ambiguous | 0.3384 | benign | 0.074 | Stabilizing | 0.995 | D | 0.606 | neutral | None | None | None | None | N |
E/S | 0.4189 | ambiguous | 0.435 | ambiguous | -1.243 | Destabilizing | 0.679 | D | 0.351 | neutral | None | None | None | None | N |
E/T | 0.294 | likely_benign | 0.2879 | benign | -0.896 | Destabilizing | 0.965 | D | 0.62 | neutral | None | None | None | None | N |
E/V | 0.1521 | likely_benign | 0.1456 | benign | 0.365 | Stabilizing | 0.997 | D | 0.634 | neutral | N | 0.387698112 | None | None | N |
E/W | 0.9514 | likely_pathogenic | 0.9539 | pathogenic | 0.726 | Stabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
E/Y | 0.7308 | likely_pathogenic | 0.7187 | pathogenic | 0.742 | Stabilizing | 0.999 | D | 0.714 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.