Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18908 | 56947;56948;56949 | chr2:178598988;178598987;178598986 | chr2:179463715;179463714;179463713 |
N2AB | 17267 | 52024;52025;52026 | chr2:178598988;178598987;178598986 | chr2:179463715;179463714;179463713 |
N2A | 16340 | 49243;49244;49245 | chr2:178598988;178598987;178598986 | chr2:179463715;179463714;179463713 |
N2B | 9843 | 29752;29753;29754 | chr2:178598988;178598987;178598986 | chr2:179463715;179463714;179463713 |
Novex-1 | 9968 | 30127;30128;30129 | chr2:178598988;178598987;178598986 | chr2:179463715;179463714;179463713 |
Novex-2 | 10035 | 30328;30329;30330 | chr2:178598988;178598987;178598986 | chr2:179463715;179463714;179463713 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/R | rs1364724756 | None | 1.0 | D | 0.887 | 0.609 | 0.656961720716 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.42E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/R | rs1364724756 | None | 1.0 | D | 0.887 | 0.609 | 0.656961720716 | gnomAD-4.0.0 | 2.03044E-06 | None | None | None | None | N | None | 1.74978E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.20501E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.9293 | likely_pathogenic | 0.9043 | pathogenic | -1.513 | Destabilizing | 1.0 | D | 0.821 | deleterious | D | 0.569988794 | None | None | N |
P/C | 0.9927 | likely_pathogenic | 0.9901 | pathogenic | -0.807 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
P/D | 0.9975 | likely_pathogenic | 0.9972 | pathogenic | -1.599 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
P/E | 0.9966 | likely_pathogenic | 0.9958 | pathogenic | -1.632 | Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | N |
P/F | 0.9996 | likely_pathogenic | 0.9995 | pathogenic | -1.299 | Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
P/G | 0.9875 | likely_pathogenic | 0.9852 | pathogenic | -1.795 | Destabilizing | 1.0 | D | 0.882 | deleterious | None | None | None | None | N |
P/H | 0.9969 | likely_pathogenic | 0.9957 | pathogenic | -1.478 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
P/I | 0.9962 | likely_pathogenic | 0.9949 | pathogenic | -0.837 | Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
P/K | 0.9982 | likely_pathogenic | 0.9975 | pathogenic | -1.389 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
P/L | 0.9794 | likely_pathogenic | 0.9762 | pathogenic | -0.837 | Destabilizing | 1.0 | D | 0.897 | deleterious | D | 0.621822232 | None | None | N |
P/M | 0.9958 | likely_pathogenic | 0.9945 | pathogenic | -0.548 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
P/N | 0.9978 | likely_pathogenic | 0.9967 | pathogenic | -0.986 | Destabilizing | 1.0 | D | 0.888 | deleterious | None | None | None | None | N |
P/Q | 0.9968 | likely_pathogenic | 0.9954 | pathogenic | -1.206 | Destabilizing | 1.0 | D | 0.843 | deleterious | D | 0.590792532 | None | None | N |
P/R | 0.9951 | likely_pathogenic | 0.994 | pathogenic | -0.821 | Destabilizing | 1.0 | D | 0.887 | deleterious | D | 0.58525094 | None | None | N |
P/S | 0.9866 | likely_pathogenic | 0.9785 | pathogenic | -1.371 | Destabilizing | 1.0 | D | 0.845 | deleterious | D | 0.554726648 | None | None | N |
P/T | 0.9789 | likely_pathogenic | 0.9682 | pathogenic | -1.311 | Destabilizing | 1.0 | D | 0.845 | deleterious | D | 0.585049136 | None | None | N |
P/V | 0.9861 | likely_pathogenic | 0.9821 | pathogenic | -1.03 | Destabilizing | 1.0 | D | 0.888 | deleterious | None | None | None | None | N |
P/W | 0.9996 | likely_pathogenic | 0.9997 | pathogenic | -1.476 | Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | N |
P/Y | 0.9994 | likely_pathogenic | 0.9993 | pathogenic | -1.235 | Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.