Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18909 | 56950;56951;56952 | chr2:178598985;178598984;178598983 | chr2:179463712;179463711;179463710 |
N2AB | 17268 | 52027;52028;52029 | chr2:178598985;178598984;178598983 | chr2:179463712;179463711;179463710 |
N2A | 16341 | 49246;49247;49248 | chr2:178598985;178598984;178598983 | chr2:179463712;179463711;179463710 |
N2B | 9844 | 29755;29756;29757 | chr2:178598985;178598984;178598983 | chr2:179463712;179463711;179463710 |
Novex-1 | 9969 | 30130;30131;30132 | chr2:178598985;178598984;178598983 | chr2:179463712;179463711;179463710 |
Novex-2 | 10036 | 30331;30332;30333 | chr2:178598985;178598984;178598983 | chr2:179463712;179463711;179463710 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1224434103 | 0.541 | 0.116 | N | 0.111 | 0.239 | 0.244539031024 | gnomAD-2.1.1 | 4.09E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.09E-06 | 0 |
E/K | rs1224434103 | 0.541 | 0.116 | N | 0.111 | 0.239 | 0.244539031024 | gnomAD-4.0.0 | 4.11078E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.40073E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1294 | likely_benign | 0.1248 | benign | -0.022 | Destabilizing | 0.906 | D | 0.353 | neutral | N | 0.476768252 | None | None | I |
E/C | 0.7799 | likely_pathogenic | 0.7536 | pathogenic | -0.362 | Destabilizing | 1.0 | D | 0.37 | neutral | None | None | None | None | I |
E/D | 0.1355 | likely_benign | 0.1296 | benign | -0.483 | Destabilizing | 0.906 | D | 0.357 | neutral | N | 0.470188996 | None | None | I |
E/F | 0.7416 | likely_pathogenic | 0.7192 | pathogenic | -0.056 | Destabilizing | 0.999 | D | 0.361 | neutral | None | None | None | None | I |
E/G | 0.1896 | likely_benign | 0.1864 | benign | -0.124 | Destabilizing | 0.979 | D | 0.405 | neutral | N | 0.472037223 | None | None | I |
E/H | 0.4785 | ambiguous | 0.4582 | ambiguous | 0.626 | Stabilizing | 0.995 | D | 0.345 | neutral | None | None | None | None | I |
E/I | 0.2694 | likely_benign | 0.2488 | benign | 0.187 | Stabilizing | 0.991 | D | 0.392 | neutral | None | None | None | None | I |
E/K | 0.1419 | likely_benign | 0.1401 | benign | 0.329 | Stabilizing | 0.116 | N | 0.111 | neutral | N | 0.463414953 | None | None | I |
E/L | 0.3302 | likely_benign | 0.3098 | benign | 0.187 | Stabilizing | 0.969 | D | 0.399 | neutral | None | None | None | None | I |
E/M | 0.4213 | ambiguous | 0.4067 | ambiguous | -0.123 | Destabilizing | 0.999 | D | 0.369 | neutral | None | None | None | None | I |
E/N | 0.2788 | likely_benign | 0.2505 | benign | 0.022 | Stabilizing | 0.984 | D | 0.378 | neutral | None | None | None | None | I |
E/P | 0.4485 | ambiguous | 0.4024 | ambiguous | 0.134 | Stabilizing | 0.999 | D | 0.361 | neutral | None | None | None | None | I |
E/Q | 0.1415 | likely_benign | 0.1398 | benign | 0.028 | Stabilizing | 0.476 | N | 0.215 | neutral | N | 0.46844595 | None | None | I |
E/R | 0.2461 | likely_benign | 0.2495 | benign | 0.596 | Stabilizing | 0.939 | D | 0.363 | neutral | None | None | None | None | I |
E/S | 0.1944 | likely_benign | 0.1791 | benign | -0.082 | Destabilizing | 0.864 | D | 0.335 | neutral | None | None | None | None | I |
E/T | 0.1977 | likely_benign | 0.1747 | benign | 0.012 | Stabilizing | 0.293 | N | 0.288 | neutral | None | None | None | None | I |
E/V | 0.1698 | likely_benign | 0.1605 | benign | 0.134 | Stabilizing | 0.959 | D | 0.431 | neutral | N | 0.477520401 | None | None | I |
E/W | 0.8813 | likely_pathogenic | 0.877 | pathogenic | -0.015 | Destabilizing | 1.0 | D | 0.411 | neutral | None | None | None | None | I |
E/Y | 0.6078 | likely_pathogenic | 0.5901 | pathogenic | 0.161 | Stabilizing | 0.999 | D | 0.391 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.