Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18910 | 56953;56954;56955 | chr2:178598982;178598981;178598980 | chr2:179463709;179463708;179463707 |
N2AB | 17269 | 52030;52031;52032 | chr2:178598982;178598981;178598980 | chr2:179463709;179463708;179463707 |
N2A | 16342 | 49249;49250;49251 | chr2:178598982;178598981;178598980 | chr2:179463709;179463708;179463707 |
N2B | 9845 | 29758;29759;29760 | chr2:178598982;178598981;178598980 | chr2:179463709;179463708;179463707 |
Novex-1 | 9970 | 30133;30134;30135 | chr2:178598982;178598981;178598980 | chr2:179463709;179463708;179463707 |
Novex-2 | 10037 | 30334;30335;30336 | chr2:178598982;178598981;178598980 | chr2:179463709;179463708;179463707 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/H | None | None | 0.1 | N | 0.281 | 0.07 | 0.173771789658 | gnomAD-4.0.0 | 1.59601E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.41896E-04 | 0 | 0 | 0 |
Y/N | None | None | 0.982 | N | 0.625 | 0.269 | 0.365509141856 | gnomAD-4.0.0 | 1.59601E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.79298E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.3886 | ambiguous | 0.4188 | ambiguous | -0.604 | Destabilizing | 0.953 | D | 0.503 | neutral | None | None | None | None | I |
Y/C | 0.1834 | likely_benign | 0.2268 | benign | 0.142 | Stabilizing | 0.999 | D | 0.663 | neutral | N | 0.472161571 | None | None | I |
Y/D | 0.1225 | likely_benign | 0.1313 | benign | 0.977 | Stabilizing | 0.982 | D | 0.644 | neutral | N | 0.408884248 | None | None | I |
Y/E | 0.3979 | ambiguous | 0.4379 | ambiguous | 0.955 | Stabilizing | 0.986 | D | 0.535 | neutral | None | None | None | None | I |
Y/F | 0.1004 | likely_benign | 0.0976 | benign | -0.29 | Destabilizing | 0.969 | D | 0.542 | neutral | N | 0.476533392 | None | None | I |
Y/G | 0.3738 | ambiguous | 0.3872 | ambiguous | -0.784 | Destabilizing | 0.986 | D | 0.574 | neutral | None | None | None | None | I |
Y/H | 0.1529 | likely_benign | 0.1954 | benign | 0.247 | Stabilizing | 0.1 | N | 0.281 | neutral | N | 0.48417144 | None | None | I |
Y/I | 0.4877 | ambiguous | 0.4946 | ambiguous | -0.161 | Destabilizing | 0.993 | D | 0.626 | neutral | None | None | None | None | I |
Y/K | 0.5145 | ambiguous | 0.5536 | ambiguous | 0.241 | Stabilizing | 0.986 | D | 0.616 | neutral | None | None | None | None | I |
Y/L | 0.4798 | ambiguous | 0.4798 | ambiguous | -0.161 | Destabilizing | 0.953 | D | 0.565 | neutral | None | None | None | None | I |
Y/M | 0.513 | ambiguous | 0.5079 | ambiguous | -0.033 | Destabilizing | 0.999 | D | 0.626 | neutral | None | None | None | None | I |
Y/N | 0.0898 | likely_benign | 0.097 | benign | 0.054 | Stabilizing | 0.982 | D | 0.625 | neutral | N | 0.466777758 | None | None | I |
Y/P | 0.9368 | likely_pathogenic | 0.9417 | pathogenic | -0.289 | Destabilizing | 0.998 | D | 0.661 | neutral | None | None | None | None | I |
Y/Q | 0.4 | ambiguous | 0.4708 | ambiguous | 0.101 | Stabilizing | 0.986 | D | 0.629 | neutral | None | None | None | None | I |
Y/R | 0.4377 | ambiguous | 0.4971 | ambiguous | 0.475 | Stabilizing | 0.986 | D | 0.627 | neutral | None | None | None | None | I |
Y/S | 0.1339 | likely_benign | 0.1483 | benign | -0.375 | Destabilizing | 0.982 | D | 0.571 | neutral | N | 0.438148362 | None | None | I |
Y/T | 0.2526 | likely_benign | 0.2785 | benign | -0.308 | Destabilizing | 0.993 | D | 0.622 | neutral | None | None | None | None | I |
Y/V | 0.3508 | ambiguous | 0.3666 | ambiguous | -0.289 | Destabilizing | 0.993 | D | 0.547 | neutral | None | None | None | None | I |
Y/W | 0.4446 | ambiguous | 0.4606 | ambiguous | -0.433 | Destabilizing | 0.999 | D | 0.623 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.