Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18917 | 56974;56975;56976 | chr2:178598961;178598960;178598959 | chr2:179463688;179463687;179463686 |
N2AB | 17276 | 52051;52052;52053 | chr2:178598961;178598960;178598959 | chr2:179463688;179463687;179463686 |
N2A | 16349 | 49270;49271;49272 | chr2:178598961;178598960;178598959 | chr2:179463688;179463687;179463686 |
N2B | 9852 | 29779;29780;29781 | chr2:178598961;178598960;178598959 | chr2:179463688;179463687;179463686 |
Novex-1 | 9977 | 30154;30155;30156 | chr2:178598961;178598960;178598959 | chr2:179463688;179463687;179463686 |
Novex-2 | 10044 | 30355;30356;30357 | chr2:178598961;178598960;178598959 | chr2:179463688;179463687;179463686 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/K | rs370348484 | None | 1.0 | N | 0.86 | 0.409 | None | gnomAD-4.0.0 | 1.59383E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86066E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.2104 | likely_benign | 0.1803 | benign | -0.63 | Destabilizing | 0.999 | D | 0.555 | neutral | N | 0.487995463 | None | None | I |
T/C | 0.7006 | likely_pathogenic | 0.6405 | pathogenic | -0.381 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | I |
T/D | 0.7245 | likely_pathogenic | 0.6913 | pathogenic | 0.135 | Stabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | I |
T/E | 0.5768 | likely_pathogenic | 0.5533 | ambiguous | 0.119 | Stabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | I |
T/F | 0.5493 | ambiguous | 0.4975 | ambiguous | -0.755 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | I |
T/G | 0.5819 | likely_pathogenic | 0.4643 | ambiguous | -0.865 | Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | I |
T/H | 0.5694 | likely_pathogenic | 0.5203 | ambiguous | -1.131 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | I |
T/I | 0.2728 | likely_benign | 0.3006 | benign | -0.105 | Destabilizing | 1.0 | D | 0.86 | deleterious | N | 0.514019918 | None | None | I |
T/K | 0.4174 | ambiguous | 0.4004 | ambiguous | -0.58 | Destabilizing | 1.0 | D | 0.86 | deleterious | N | 0.470536318 | None | None | I |
T/L | 0.1507 | likely_benign | 0.1457 | benign | -0.105 | Destabilizing | 0.999 | D | 0.744 | deleterious | None | None | None | None | I |
T/M | 0.1247 | likely_benign | 0.1222 | benign | 0.077 | Stabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | I |
T/N | 0.2896 | likely_benign | 0.2515 | benign | -0.459 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | I |
T/P | 0.8091 | likely_pathogenic | 0.7286 | pathogenic | -0.247 | Destabilizing | 1.0 | D | 0.857 | deleterious | D | 0.527624241 | None | None | I |
T/Q | 0.4205 | ambiguous | 0.3818 | ambiguous | -0.613 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | I |
T/R | 0.4202 | ambiguous | 0.3773 | ambiguous | -0.364 | Destabilizing | 1.0 | D | 0.855 | deleterious | D | 0.523543479 | None | None | I |
T/S | 0.2141 | likely_benign | 0.1808 | benign | -0.749 | Destabilizing | 0.999 | D | 0.553 | neutral | N | 0.475808247 | None | None | I |
T/V | 0.2314 | likely_benign | 0.2381 | benign | -0.247 | Destabilizing | 0.999 | D | 0.634 | neutral | None | None | None | None | I |
T/W | 0.8656 | likely_pathogenic | 0.8271 | pathogenic | -0.705 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | I |
T/Y | 0.6553 | likely_pathogenic | 0.5649 | pathogenic | -0.465 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.