Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18921 | 56986;56987;56988 | chr2:178598949;178598948;178598947 | chr2:179463676;179463675;179463674 |
N2AB | 17280 | 52063;52064;52065 | chr2:178598949;178598948;178598947 | chr2:179463676;179463675;179463674 |
N2A | 16353 | 49282;49283;49284 | chr2:178598949;178598948;178598947 | chr2:179463676;179463675;179463674 |
N2B | 9856 | 29791;29792;29793 | chr2:178598949;178598948;178598947 | chr2:179463676;179463675;179463674 |
Novex-1 | 9981 | 30166;30167;30168 | chr2:178598949;178598948;178598947 | chr2:179463676;179463675;179463674 |
Novex-2 | 10048 | 30367;30368;30369 | chr2:178598949;178598948;178598947 | chr2:179463676;179463675;179463674 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs2052542764 | None | 0.999 | N | 0.83 | 0.674 | 0.798510955838 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
L/P | rs2052542764 | None | 0.999 | N | 0.83 | 0.674 | 0.798510955838 | gnomAD-4.0.0 | 3.0454E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.61505E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9596 | likely_pathogenic | 0.9556 | pathogenic | -2.853 | Highly Destabilizing | 0.992 | D | 0.574 | neutral | None | None | None | None | N |
L/C | 0.9474 | likely_pathogenic | 0.9519 | pathogenic | -1.943 | Destabilizing | 1.0 | D | 0.662 | neutral | None | None | None | None | N |
L/D | 0.9999 | likely_pathogenic | 0.9998 | pathogenic | -3.451 | Highly Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | N |
L/E | 0.9985 | likely_pathogenic | 0.9978 | pathogenic | -3.162 | Highly Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
L/F | 0.9702 | likely_pathogenic | 0.9739 | pathogenic | -1.803 | Destabilizing | 0.999 | D | 0.614 | neutral | None | None | None | None | N |
L/G | 0.9969 | likely_pathogenic | 0.996 | pathogenic | -3.366 | Highly Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
L/H | 0.9988 | likely_pathogenic | 0.9983 | pathogenic | -3.035 | Highly Destabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | N |
L/I | 0.1742 | likely_benign | 0.1948 | benign | -1.275 | Destabilizing | 0.611 | D | 0.247 | neutral | None | None | None | None | N |
L/K | 0.9981 | likely_pathogenic | 0.997 | pathogenic | -2.374 | Highly Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
L/M | 0.509 | ambiguous | 0.5591 | ambiguous | -1.476 | Destabilizing | 0.998 | D | 0.595 | neutral | N | 0.472844177 | None | None | N |
L/N | 0.9991 | likely_pathogenic | 0.9987 | pathogenic | -3.132 | Highly Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
L/P | 0.9983 | likely_pathogenic | 0.998 | pathogenic | -1.799 | Destabilizing | 0.999 | D | 0.83 | deleterious | N | 0.50133046 | None | None | N |
L/Q | 0.9967 | likely_pathogenic | 0.9951 | pathogenic | -2.758 | Highly Destabilizing | 0.999 | D | 0.82 | deleterious | N | 0.512851349 | None | None | N |
L/R | 0.9962 | likely_pathogenic | 0.9945 | pathogenic | -2.475 | Highly Destabilizing | 0.999 | D | 0.817 | deleterious | N | 0.512851349 | None | None | N |
L/S | 0.9983 | likely_pathogenic | 0.9979 | pathogenic | -3.491 | Highly Destabilizing | 0.999 | D | 0.795 | deleterious | None | None | None | None | N |
L/T | 0.9745 | likely_pathogenic | 0.9688 | pathogenic | -3.058 | Highly Destabilizing | 0.998 | D | 0.657 | neutral | None | None | None | None | N |
L/V | 0.1751 | likely_benign | 0.1923 | benign | -1.799 | Destabilizing | 0.543 | D | 0.326 | neutral | N | 0.391986424 | None | None | N |
L/W | 0.998 | likely_pathogenic | 0.9979 | pathogenic | -2.019 | Highly Destabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | N |
L/Y | 0.9978 | likely_pathogenic | 0.9975 | pathogenic | -1.999 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.