Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18930 | 57013;57014;57015 | chr2:178598922;178598921;178598920 | chr2:179463649;179463648;179463647 |
N2AB | 17289 | 52090;52091;52092 | chr2:178598922;178598921;178598920 | chr2:179463649;179463648;179463647 |
N2A | 16362 | 49309;49310;49311 | chr2:178598922;178598921;178598920 | chr2:179463649;179463648;179463647 |
N2B | 9865 | 29818;29819;29820 | chr2:178598922;178598921;178598920 | chr2:179463649;179463648;179463647 |
Novex-1 | 9990 | 30193;30194;30195 | chr2:178598922;178598921;178598920 | chr2:179463649;179463648;179463647 |
Novex-2 | 10057 | 30394;30395;30396 | chr2:178598922;178598921;178598920 | chr2:179463649;179463648;179463647 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | rs727503595 | None | 1.0 | N | 0.587 | 0.312 | 0.284150004643 | gnomAD-4.0.0 | 6.84471E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99651E-06 | 0 | 0 |
R/K | rs746833235 | 0.097 | 0.997 | N | 0.591 | 0.279 | 0.350964488264 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.95E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.8963 | likely_pathogenic | 0.8518 | pathogenic | 0.1 | Stabilizing | 0.999 | D | 0.593 | neutral | None | None | None | None | N |
R/C | 0.6128 | likely_pathogenic | 0.56 | ambiguous | -0.17 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
R/D | 0.9602 | likely_pathogenic | 0.9489 | pathogenic | -0.192 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
R/E | 0.8886 | likely_pathogenic | 0.8402 | pathogenic | -0.134 | Destabilizing | 0.999 | D | 0.635 | neutral | None | None | None | None | N |
R/F | 0.8631 | likely_pathogenic | 0.8279 | pathogenic | -0.163 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
R/G | 0.7991 | likely_pathogenic | 0.7449 | pathogenic | -0.071 | Destabilizing | 1.0 | D | 0.587 | neutral | N | 0.48867597 | None | None | N |
R/H | 0.3341 | likely_benign | 0.2699 | benign | -0.6 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
R/I | 0.6857 | likely_pathogenic | 0.5786 | pathogenic | 0.507 | Stabilizing | 1.0 | D | 0.737 | prob.delet. | N | 0.470154244 | None | None | N |
R/K | 0.2912 | likely_benign | 0.2456 | benign | -0.053 | Destabilizing | 0.997 | D | 0.591 | neutral | N | 0.494044504 | None | None | N |
R/L | 0.6368 | likely_pathogenic | 0.5832 | pathogenic | 0.507 | Stabilizing | 1.0 | D | 0.587 | neutral | None | None | None | None | N |
R/M | 0.7369 | likely_pathogenic | 0.6703 | pathogenic | -0.008 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | N |
R/N | 0.9059 | likely_pathogenic | 0.8722 | pathogenic | 0.047 | Stabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
R/P | 0.9671 | likely_pathogenic | 0.9571 | pathogenic | 0.391 | Stabilizing | 1.0 | D | 0.68 | prob.neutral | None | None | None | None | N |
R/Q | 0.3682 | ambiguous | 0.3011 | benign | 0.014 | Stabilizing | 1.0 | D | 0.67 | neutral | None | None | None | None | N |
R/S | 0.9259 | likely_pathogenic | 0.9001 | pathogenic | -0.169 | Destabilizing | 1.0 | D | 0.613 | neutral | N | 0.48959869 | None | None | N |
R/T | 0.8225 | likely_pathogenic | 0.7273 | pathogenic | 0.011 | Stabilizing | 1.0 | D | 0.625 | neutral | N | 0.488542684 | None | None | N |
R/V | 0.7781 | likely_pathogenic | 0.7 | pathogenic | 0.391 | Stabilizing | 1.0 | D | 0.72 | prob.delet. | None | None | None | None | N |
R/W | 0.5072 | ambiguous | 0.4484 | ambiguous | -0.314 | Destabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | N |
R/Y | 0.6976 | likely_pathogenic | 0.6311 | pathogenic | 0.104 | Stabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.