Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1894 | 5905;5906;5907 | chr2:178776184;178776183;178776182 | chr2:179640911;179640910;179640909 |
N2AB | 1894 | 5905;5906;5907 | chr2:178776184;178776183;178776182 | chr2:179640911;179640910;179640909 |
N2A | 1894 | 5905;5906;5907 | chr2:178776184;178776183;178776182 | chr2:179640911;179640910;179640909 |
N2B | 1848 | 5767;5768;5769 | chr2:178776184;178776183;178776182 | chr2:179640911;179640910;179640909 |
Novex-1 | 1848 | 5767;5768;5769 | chr2:178776184;178776183;178776182 | chr2:179640911;179640910;179640909 |
Novex-2 | 1848 | 5767;5768;5769 | chr2:178776184;178776183;178776182 | chr2:179640911;179640910;179640909 |
Novex-3 | 1894 | 5905;5906;5907 | chr2:178776184;178776183;178776182 | chr2:179640911;179640910;179640909 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs751529942 | -1.212 | 0.993 | N | 0.338 | 0.292 | 0.664580999671 | gnomAD-2.1.1 | 7.97E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.53E-05 | None | 0 | 0 | 0 |
I/V | rs751529942 | -1.212 | 0.993 | N | 0.338 | 0.292 | 0.664580999671 | gnomAD-4.0.0 | 6.36215E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 5.73082E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9646 | likely_pathogenic | 0.9682 | pathogenic | -2.207 | Highly Destabilizing | 0.999 | D | 0.525 | neutral | None | None | None | None | N |
I/C | 0.9804 | likely_pathogenic | 0.9837 | pathogenic | -1.036 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
I/D | 0.9956 | likely_pathogenic | 0.9956 | pathogenic | -2.271 | Highly Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
I/E | 0.9889 | likely_pathogenic | 0.9895 | pathogenic | -2.124 | Highly Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | N |
I/F | 0.6383 | likely_pathogenic | 0.6403 | pathogenic | -1.447 | Destabilizing | 1.0 | D | 0.742 | deleterious | N | 0.514848004 | None | None | N |
I/G | 0.9935 | likely_pathogenic | 0.994 | pathogenic | -2.654 | Highly Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
I/H | 0.9833 | likely_pathogenic | 0.9839 | pathogenic | -2.038 | Highly Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | N |
I/K | 0.9851 | likely_pathogenic | 0.984 | pathogenic | -1.559 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
I/L | 0.3743 | ambiguous | 0.3951 | ambiguous | -0.952 | Destabilizing | 0.993 | D | 0.357 | neutral | N | 0.491818601 | None | None | N |
I/M | 0.3913 | ambiguous | 0.4092 | ambiguous | -0.564 | Destabilizing | 1.0 | D | 0.734 | prob.delet. | N | 0.504185326 | None | None | N |
I/N | 0.9217 | likely_pathogenic | 0.9262 | pathogenic | -1.664 | Destabilizing | 1.0 | D | 0.789 | deleterious | N | 0.499914249 | None | None | N |
I/P | 0.9944 | likely_pathogenic | 0.9945 | pathogenic | -1.348 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
I/Q | 0.9778 | likely_pathogenic | 0.9794 | pathogenic | -1.67 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
I/R | 0.9768 | likely_pathogenic | 0.9753 | pathogenic | -1.105 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
I/S | 0.947 | likely_pathogenic | 0.9509 | pathogenic | -2.282 | Highly Destabilizing | 1.0 | D | 0.755 | deleterious | N | 0.500082925 | None | None | N |
I/T | 0.9107 | likely_pathogenic | 0.9206 | pathogenic | -2.017 | Highly Destabilizing | 1.0 | D | 0.725 | prob.delet. | N | 0.462323146 | None | None | N |
I/V | 0.2662 | likely_benign | 0.2841 | benign | -1.348 | Destabilizing | 0.993 | D | 0.338 | neutral | N | 0.487476483 | None | None | N |
I/W | 0.979 | likely_pathogenic | 0.9795 | pathogenic | -1.81 | Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
I/Y | 0.9172 | likely_pathogenic | 0.9182 | pathogenic | -1.499 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.